| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5023 |
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| Symbol | |
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| ID | 6313259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5380274 |
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| End bp | 5383498 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642653704 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001927654 |
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| Protein GI | 188584209 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.182442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG CCCATTTCTT CGTCGACCGG CCGATCTTCG CCTCGGTCAC GTCGATCGTC
TTCCTGATCC TCGGCTTCGT CGCCTACGAG AAGCTGCCGG TCTCGCAATA TCCCGAGATC
GTGCCGCCGA CCGTGACCGT GCGCGCGAGC TTCCCCGGCG CCAACGCCGA GACGGTGGCG
GCCACGATCG CGACGCCGCT GGAACAGGAG ATCAACGGCG TCGACAACAT GCTCTACATG
ACGTCGTTGT CGACCAACGA CGGCGCCATG CTGCTGACCG TGACCTTCAA GGTCGGCACC
AACCTCGATA TCGCCAACGT GCTGGTGCAG AACCGGCTCT CGGTGGCGCA GCCGCGCCTG
CCGCCGGACG TGCGCAACCT CGGCGTCACC GTCCGCAAGG CCTCGCCCGA CCTGATGCTG
GTCGTGCACC TGCTCTCGCC CAAGCGCACC TACGACCAGA ACTATCTGGC CAACTACATC
TACCTCAACA TCCGCGACGA GCTGCTGCGG CTGGACGGCG TCGGCGACAT CTCGATCTTC
GGCGGCAACG AGTATGCCGA GCGGGTCTGG ATCGACCCGC AGAAGATGGC CGCCTACGGC
CTGACCACCA CCGACGTCAC GAGCGCGCTG CAGGAGCAGA ACGTGCAGGT GGCCGCCGGC
CAGCTCAACG GCCCGCCGGC CGCGCCGGGC GCCGCCTTCC AGCTCGTGGT GCAGTCGCAA
GGGCGCTTCC AGTCGCCGGA GCAGTTCGCC GACGTCATCG CCAAGGCGAG CGACGGGCGC
CTCGTGCGCG TGCGCGACAT CGCCCGCGTC GAGATGGGCC AGAAGGACTA CACCACGAAC
TCCTTCCTCA ACGACACGCC CGCGGTCGGC ATCGGCGCCT TCCAGCGGCC GGGCACCAAC
GCGCTCGAGG CCGCGGAATC GGTCAAGGCG ACGATGGAGG AGCTGAAGAA GCGGTTCCCG
CCGGACGTCG AGTACCGCAT CGCCTACAAC CCGACGGAGT TCATCGAGGA GTCGATCCAC
GAGGTCTACA AGACCCTGTT CGAGGCCGTC CTCCTCGTCG TCATCGTGGT CCTGGTCTTC
CTCCAGAGCT GGCGCACGGC GCTGATTCCG GTGATCGCGA TCCCCGTGTC GCTGGTCGGC
ACCTTCGCGG TGATGTCGGC GCTCGGCTTC TCGCTCAACA ACCTGACCCT GTTCGGCCTC
GTGCTCGCCA TCGGCATCGT CGTCGACGAC GCCATCGTCG TGGTCGAGAA CGTCGAGCGC
AACATGGCCG AGGGGCTCTC GCCCGGCGAG GCGGCCCACA AGACCATGGA CGAGGTGGGC
GGCGCGGTCA TCGCCATCGC CCTCGTGCTC GCGGCGGTGT TCATCCCGAC CGCCTTCATC
CCCGGCATCT CGGGCCAGTT CTACAAGCAG TTCGCGCTCA CCATCGCGGC CTCGACCATC
ATCTCGGCCT TCAACTCGCT CACCCTCTCG CCGGCGCTCT GCAAGCTTCT GCTGAAGCCG
CACCACGAGC ACAGACCGCC GAAATTCTTC CTCACCCGCT TCGTCAACTG GCTCGCGAGC
CTGTTCAACC GCGGTTTCGA CTGGCTGTCG AACGTCTACG GCCACACGAT CCGCGTGCTG
ACCGGCACCG TGGTCGGCGT GATCGCGATG CTGATCGTCT ACGCGGCGGT GATCGCCGGC
ACGCTCCACC TCGCCCGGAC GACGCCCACG GGCTTCATCC CGGATCAGGA CCAGGGCTAT
CTCATCGGCG TGGTGCAGCT CCCCTCGGGT TCCTCGCTCG ACCGCACCAC GGAGGTGGTG
AACCGCGCCG CCGCCATCGC CCGCAAGATC GACGGCATCA CCAACACCGT CATCATCGCC
GGCTTCGACG GCGCCACCTT CACCAACACC ACCAACGCAG CGGTGATGTT CCTGACGCTC
AAGAATTCCA AGGAGCGGGC GGCGCAGGGA CGCAGCGCGG CGGTGATCAC CGGCGACGTG
ATGAAGGCGA CCGCCGGCAT CCAGGAGGCG CGGGTCATCG TCATCCCGCC GCCGCCGGTG
CGCGGCCTCG GCCAGGGCGG CGGCTTCAAG ATGCAGATCG AGAGCCGTCA ATCCTCCGAT
ATCGGTCCGC TGCTCGCGGC GGCCGGCGAG GTGATGGGGC AGGCCAACCA GAGCAAGGAC
GTGACGCGGG TCTTCACGAC CTTCAGCAAC GACACGCCGC AGCTCTACCT CGACATCGAC
CGCACCATCG CGCGCATGCT CAACGTGCCG CTCGCCAACG TCTTCTCGAC CGTGCAGACG
GCGCTGGGCG GTGCCTACGT CAACGACTTC AACACGCTGG GCCGCATCTA TCAGGTGCGC
GTGCAGGGCG ACGCGGTCTA CCGCATGTCC CAGCGCGACA TCGAGCAGCT GAAGGTGCGC
TCCTCCACCG GCGCCCTGGT GCCGATGGGG ACGCTGGCCT CGATCCGCGA GATCTCTGGC
CCGCAGATCG TGCAGCGGTT CAACCTGTAC TACTCGGTGC CGCTGCAGGG CGTGGCGCAG
GCGGGCGTCT CGACCGGTCA GGCGCTCGAC ACCATGGAGG AGATCGCCAA GCGGGCCCTG
CCCGAGGGCT ATTCCTACGA CTGGACCGAG ATCGCCTTCC AGCAGAAGGC GGCGGGCGGC
ACGGCGATCT ACGTCTTCGC GCTCGGCGTG CTCCTCGTCT TCCTCGTGCT CGCAGCGCAG
TACGAGTCCT GGGCCCTGCC GCTGGCGATC CTGCTGGTGG TGCCGACCGG CGTGCTCGCC
GCCTTGTTCG GGGTGCAGTT GCGCGGGCAG GACAACAACA TCCTGACCCA GATCGGCCTG
ATCGTGCTCA TCGGTCTGGC GGCCAAGAAC GCGATCCTGA TCGTGGAGTT CGCCCACGAC
ATCGAGGAGA GCGAGCACAA GGGACCGGTG GATGCGGCGG TCCAGGCCTG CCGCCTGCGC
CTGCGCCCGA TCCTGATGAC GGCCTTCGCC TTCATCCTCG GCGTGCTGCC GCTGGTGATC
GCCACGGGCC CCGGCGCCGA GATGCGTCAG GCGCTCGGCA CGGCGGTGTT CTTCGGGATG
ATCGGCGCGA CCTTCTTCGG CCTGTTCCTG ACCCCGGTCT TCTACGTGGT GATCCGCAAG
GCGGTGATCT GGATCGGCCG CAAGCGCGGC AAGGACCCGC ACAGCCACGA TCCGCACGGG
AGGGACCCGC ACGGCGAACC GAATGGAGCC CCGGCCCACG GCTGA
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| Protein sequence | MRFAHFFVDR PIFASVTSIV FLILGFVAYE KLPVSQYPEI VPPTVTVRAS FPGANAETVA
ATIATPLEQE INGVDNMLYM TSLSTNDGAM LLTVTFKVGT NLDIANVLVQ NRLSVAQPRL
PPDVRNLGVT VRKASPDLML VVHLLSPKRT YDQNYLANYI YLNIRDELLR LDGVGDISIF
GGNEYAERVW IDPQKMAAYG LTTTDVTSAL QEQNVQVAAG QLNGPPAAPG AAFQLVVQSQ
GRFQSPEQFA DVIAKASDGR LVRVRDIARV EMGQKDYTTN SFLNDTPAVG IGAFQRPGTN
ALEAAESVKA TMEELKKRFP PDVEYRIAYN PTEFIEESIH EVYKTLFEAV LLVVIVVLVF
LQSWRTALIP VIAIPVSLVG TFAVMSALGF SLNNLTLFGL VLAIGIVVDD AIVVVENVER
NMAEGLSPGE AAHKTMDEVG GAVIAIALVL AAVFIPTAFI PGISGQFYKQ FALTIAASTI
ISAFNSLTLS PALCKLLLKP HHEHRPPKFF LTRFVNWLAS LFNRGFDWLS NVYGHTIRVL
TGTVVGVIAM LIVYAAVIAG TLHLARTTPT GFIPDQDQGY LIGVVQLPSG SSLDRTTEVV
NRAAAIARKI DGITNTVIIA GFDGATFTNT TNAAVMFLTL KNSKERAAQG RSAAVITGDV
MKATAGIQEA RVIVIPPPPV RGLGQGGGFK MQIESRQSSD IGPLLAAAGE VMGQANQSKD
VTRVFTTFSN DTPQLYLDID RTIARMLNVP LANVFSTVQT ALGGAYVNDF NTLGRIYQVR
VQGDAVYRMS QRDIEQLKVR SSTGALVPMG TLASIREISG PQIVQRFNLY YSVPLQGVAQ
AGVSTGQALD TMEEIAKRAL PEGYSYDWTE IAFQQKAAGG TAIYVFALGV LLVFLVLAAQ
YESWALPLAI LLVVPTGVLA ALFGVQLRGQ DNNILTQIGL IVLIGLAAKN AILIVEFAHD
IEESEHKGPV DAAVQACRLR LRPILMTAFA FILGVLPLVI ATGPGAEMRQ ALGTAVFFGM
IGATFFGLFL TPVFYVVIRK AVIWIGRKRG KDPHSHDPHG RDPHGEPNGA PAHG
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