| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5016 |
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| Symbol | |
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| ID | 6308968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5369235 |
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| End bp | 5371097 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642653697 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001927647 |
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| Protein GI | 188584202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.346719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGAC GGATCGAGGA TTACGCCCTG ATCGGCGACG GGCGCACCGC CGCTCTGGTC
GGGCGCGACG GCAGCATCGA CTGGCTGTGC ATGCCGCGCT TCGATGCCGC CGCGCTGTTC
GCGAGCCTGC TCGGAACCGA GGAGCACGGC TTCTGGAAGC TCGCGCCCGC GGCGGAGGGG
GCGCAGCATT CCTGGCGCTA CCGCACCGGC TCGCTAGTGC TCGAGACGAC GCACAAGACC
CATGAGGGCG AGGTCCGCGT CACCGATTTC ATGCCCGTCG GCGACGGCAG CCACGTCATC
CGCCTCGTCG AGGGGATACG CGGGCGGATG GCCATGCGCA TGGATCTCGC CGTGCGCTTC
GATTACGGCT CGGCGGTGCC CTGGGTCTCG CGCAGCGAAC TCGGGGACCT GCGCGCCATT
TCCGGGCCGC ACAAGGTGGT CCTGCGCACC AACGCGCCGA TGCGCGGCTC CTCGCATCAG
ACCACGGTCT CGGAATTCAC GGTCTACAAG GGCGACGCGG TCCGCTTCGT GCTCAGCTAC
GGCGCCTCGC ACGAGGAGGA TCCGCCGCCG ATCGAGCCGC GCCGCTGGCT CGACGACACC
AACCGGTTCT GGCGCGAATG GTCGAGCCGC TGCACCGCCG CACAGACGCC GTGGGACGAC
ATCCTGCGCC GCTCGCTCCT GACCCTGAAG GCGCTGATCT ACCGGCCCAC CGGCGGCATC
GTCGCCGCGC CCACCACCTC GCTCCCCGAG GAACTCGGCG GCTCCCGCAA CTGGGACTAC
CGTTTCTGCT GGCTGCGCGA CTCGACCTTC ACGCTGCTGG CGCTGATGGA TTCCGGCTAC
ATCGAGGAGG CCCGCGCCTG GCGCGACTGG CTGACCCGGG CGGTGGCGGG CAACCCGGAG
CAGGCGCACA TCCTCTACGG CATCGGCGGC GAGCGGCTCC TGCCGGAGAT CGAACTCGAC
TGGTTGCCCG GTTACGAGAA CTCACGGCCC GTGCGCATCG GCAACGCGGC GATCGCGCAG
TTCCAGCTCG ACGTCTACGG AGAGCTGTTC GATGCGCTGT TCCAGGCCCG AGCCCGCGGC
ATGGGGCAGA ACAAGGAGGG CCTGCGCGTC GGTCAGGCGC TGATCAAGCA CCTTGAGACG
GCGTGGCGCG AGCCGGACGA GGGGATCTGG GAGGTGCGCG GCGGGCGGCG CCACTTCGTC
CATTCCAAGG TCATGGCCTG GGTCGCCTTC GACCGGGCGA TCCGCAGCGT CGAGCTGATG
GGCGTGGACG ATCTGCGATC CGCCGAGCCG CCGGTGGCGC ACTGGAAGGC GATCCGCGAC
GAGATCCACG CCGAGGTCTG CGACAAGGGG TTCGACCCCG AGCTGAACAG CTTCGTCCAG
TCCTACGGCA GCAAGGCGCT CGATGCGAGC CTGCTCCTGA TCGCGCATAT GGGCTTCCTG
CCCCAGGACG ATCCCCGCGT CGTCGGGACG GTGGCGGCGA TCGAGCGGCA CCTGATGCGC
GACGGCTTCG TCCTGCGCTA CGAGACCGAA GGCCAGACCA CCGACGGCCT GCCCGGCAAC
GAGGGCGCCT TCCTGCCCTG CAGCTTCTGG TATGCCGACA ACCTGATCGG ACTCGGCCGC
TGCCAGGAGG CCCGCACCCT GATCGAGCGC CTGATCGGCG TCTGCAACGA CCTCGGACTG
GTCGCCGAGG AGTACGACGT GCGCGAAAAA CGGCTGGTGG GGAACTTCCC TCAGGCGTTC
ACACATGTTG CGCTCGTCAA CACGATCCTC AATTACAGCC GCGCGGTCGG TCCGGCGACG
GAACGAGGCA GCGGCGCGGA CCATTCCGAG TCGAGGGTAG GCGAATCCAT CGCGGCGCAG
TAG
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| Protein sequence | MAGRIEDYAL IGDGRTAALV GRDGSIDWLC MPRFDAAALF ASLLGTEEHG FWKLAPAAEG
AQHSWRYRTG SLVLETTHKT HEGEVRVTDF MPVGDGSHVI RLVEGIRGRM AMRMDLAVRF
DYGSAVPWVS RSELGDLRAI SGPHKVVLRT NAPMRGSSHQ TTVSEFTVYK GDAVRFVLSY
GASHEEDPPP IEPRRWLDDT NRFWREWSSR CTAAQTPWDD ILRRSLLTLK ALIYRPTGGI
VAAPTTSLPE ELGGSRNWDY RFCWLRDSTF TLLALMDSGY IEEARAWRDW LTRAVAGNPE
QAHILYGIGG ERLLPEIELD WLPGYENSRP VRIGNAAIAQ FQLDVYGELF DALFQARARG
MGQNKEGLRV GQALIKHLET AWREPDEGIW EVRGGRRHFV HSKVMAWVAF DRAIRSVELM
GVDDLRSAEP PVAHWKAIRD EIHAEVCDKG FDPELNSFVQ SYGSKALDAS LLLIAHMGFL
PQDDPRVVGT VAAIERHLMR DGFVLRYETE GQTTDGLPGN EGAFLPCSFW YADNLIGLGR
CQEARTLIER LIGVCNDLGL VAEEYDVREK RLVGNFPQAF THVALVNTIL NYSRAVGPAT
ERGSGADHSE SRVGESIAAQ
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