Gene Mpop_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5009 
Symbol 
ID6313785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5362011 
End bp5363231 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content72% 
IMG OID642653690 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001927640 
Protein GI188584195 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.323381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.355507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA AGGACAGACT CGTCGTCGTC GGCAACGGCA TGGCCTCGCT CCGCTTCCTC 
GAGCGGCTGA CGGAGCGTGC GCCGGGCCGC TACGACGTGA CGGTGGTCGG CGCCGAGCCG
GTGGCGGCCT ACAACCGGGT GCTGCTCTCC TCGCTGCTCG GCGGCGAGGT GGACGAGGCG
GCCTGCGGCT TCCGTCCGCT CTCCTGGTAC GAGGAGCATG GGCTACGCCT CGTCACCGGC
GCGCCGGTCA CCGAGATCGA CCGGGCCAAC CGCATTGCGC TGGTCGGAGA GACGCATGTC
CTGCCCTATG ACCGGTTGGT CCTGGCAGTG GGCTCGCTGC CGATCCGTCT GCCGCTACCG
GGGATCGACC TGCCCGGCGT CCTGACCTTC CGCGATTTTG CCGACGTGGC GGCGATCCGG
AAGGCCGCCG TGGAGCATGC CAAGGCCGTG GTGATCGGCG GCGGCCTGCT CGGGCTGGAG
GCCGCGGTCG GGCTCGCCCG GCTCGGGGTC GATACGACGC TGGTCCACGT CATGGACCGG
GTGATGGAGC GCCAGCTCGA CCACGCCGCC GCCCGCCTCG TGCGCACGGC GATGGAGGCC
CGCGGCGTCA AGGTCGTGCT CTCGGCCGAC ACCGCGGCGA TCGAGGGCAA CGGCAAGGTC
GAGCGGCTGC GGATGAAGGA CGGCAGCGTG ATCCCCGCCG ACCTCGTGGT GATGTCGGTC
GGCATCCGTG CCTCGACGGC GCTGGCGCAG TCCTGCGGTC TCGCTTGCGC GCGCGGCATC
ACGGTGGACG ACCGGATGAC GACCTCCGAT CCGGCGATCC ATGCGCTCGG CGAATGCGCC
GAGCACAGGG GCGTCGTTTA CGGCCTCGTG GAGCCCGCCT ACGAGCAGGC CGAGGTGCTG
GCGCGACACC TCGTCGGCGA GGCGGCCGCC TATCCCGGCA CGTCGCTTGC CACGAGCCTG
AAGGTGTCGG GGCTGCCGGT CTTCTCGGCC GGCGTGGTCG ATACGCCGGA CGGCGCCGAG
GCGGTGGTGA TGCATGACGC CGCCGCCGGG CTTTACCGCA AGCTGATCAT CGCCGACGGC
CGGCTCGCGG GAGCCGTCTT CGTCGGCGAC ATCTCGGAGC AGGCGCGCTG CAAGGAGCTG
ATCCGCTCCG GCGCGCCGCT CGCCCCCGAC GACCGGGACG ACCTGATGTT CGGCCCGGCC
CCGAAAACCC TCGCAGCGTG A
 
Protein sequence
MSAKDRLVVV GNGMASLRFL ERLTERAPGR YDVTVVGAEP VAAYNRVLLS SLLGGEVDEA 
ACGFRPLSWY EEHGLRLVTG APVTEIDRAN RIALVGETHV LPYDRLVLAV GSLPIRLPLP
GIDLPGVLTF RDFADVAAIR KAAVEHAKAV VIGGGLLGLE AAVGLARLGV DTTLVHVMDR
VMERQLDHAA ARLVRTAMEA RGVKVVLSAD TAAIEGNGKV ERLRMKDGSV IPADLVVMSV
GIRASTALAQ SCGLACARGI TVDDRMTTSD PAIHALGECA EHRGVVYGLV EPAYEQAEVL
ARHLVGEAAA YPGTSLATSL KVSGLPVFSA GVVDTPDGAE AVVMHDAAAG LYRKLIIADG
RLAGAVFVGD ISEQARCKEL IRSGAPLAPD DRDDLMFGPA PKTLAA