| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4954 |
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| Symbol | |
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| ID | 6311119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5294072 |
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| End bp | 5297515 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 642653635 |
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| Product | double-strand break repair helicase AddA |
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| Protein accession | YP_001927585 |
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| Protein GI | 188584140 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.218744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCC CGCTGACCGG CTTCACCGTC GATGACCTGA CCAAGGCGGC CCAGCGCCGG
GCGGCGGACC CGCGCCTCTC GGCCTGGGTC TCGGCCAATG CGGGAGCGGG CAAGACCAAG
GTGCTCACCG ACCGGGTGCT GCGCCTGCTC CTCGACGGGG CCCCGCCCGG CCGCATCCTC
TGCCTCACCT TCACCAAGGC GGCGGCCGCC AACATGTCGA TCCGCGTGTT CCAGCGCCTC
GGCCGCTGGG TGACGCTGGA CGACGCGGCG CTGACCGCCG AGCTCATCGA ACTCACCGGC
GAGCGGCCGG CCCGCGACAC CCTGCGGCTC GCCCGCCGCC TGTTCGCCCG CGCCGTCGAG
ACGCCGGGGG GCCTCAAGAT CGAGACCCTG CACGCGCTCT GCGAGCGGCT GCTGCACATG
TTCCCGTTCG AGGCCAACGT GCCGGCCCGC TTCGTCGTGC TCGACGACAA CCAGTCGCGC
GAGGCGTTCG AGATCGAGAC CGACAACGTG CTCGCCGACG CGTTCCTCGG CAACGATCAG
ACGCTCTCCG ACGCATTCGC CGTCGTGGGC GCGGAAGCCT CCGGCGATAC CCTGCGCGAG
GCGATCCGCG CCGCCATGCG GACCCGCGCC CTGTTCTCCG ACCATCGCGC CCTGGAGCCG
GCGCTCGCCC GCCTGCCGCG CGCGCTGGCG CTCGCGGACG GCGCCAGCGT CGCGACCATC
GAGAGGGCGA TCCTGGAGGG CAGCACGCTG GGCGACTGGC GCGCGGTCGC AGGCCGGCTG
CGCACCGGCA AGGCCACGGA CGAGCGGCTC GCCGACGGGC TTGTGGAGGC GGACGCCGCC
CTCGAAGCGG GCAAGGCCCT GGCGCCCTAC CGCTCGGTCT TCTTCACCGA CAAGGACGAG
CCGCGGGCGG CGAAGTCGTT CGGCACCAAG GCGGTGCCGG AGGAGGTGAA GCAGGCGCTC
CTCGACGAGC AGGCCCGGCT GATCCCGCTC TTCGACAGCT TGCGCGCCGC CCGCGCGCTC
GCCCGGACGC AGGGGCTGTT CCGGCTGGCC GCCGAGATCC ACCGCCGGGT CGAGGCGCAG
AAGACCCGGC TCGGCGCCCT CGATTTCGAC GACCTGATCC ACAAGACCCT CGACCTGCTC
TCGCGGGTCG GCGCCTCCTG GGTCCTGTAC AAGCTCGACC GCGGCGTCGA TCACGTCCTC
GTCGATGAGG CGCAGGACAC CAACCCGCAG CAATGGGAGA TCCTGCGCAC CCTCACCGCC
GAGTTCGCGG CGGGCGAAGG GGCACGGGGC CTGACCCGCA CCCGCTTCGC CGTGGGCGAT
CCCAAGCAGT CGATCTACAG CTTCCAGGGT GCCGACCCGC GGGAGTTCGA GCTGACCCGC
CGCGCCTGGG AGCGGGCGGC GAAAGGCGCG GAACTCGACT TCGCCGATGT CAGCCTGCGG
CTGTCCTTCC GCACCGCGAG CCACGTGCTC GCCGCGGTCG ATGCGGTGTT CCGCGTGCCG
GAGCACTTCG CCGGCCTCTC CTTCGAGGCC GGCACGCCGG GCACCGTGCA CGCCTCTGCC
CGGGCCGGGG TGCCCGGCGC GGTCGAATTG TGGGGTATCG AGGAGCCGGC GGAGGCCGAG
GAGCCCGATG CCTGGGCCGC GCCCGTCGAT GCGCCCGAGC CCAACGCTCC GGCCATCGTC
ACGGCGCGCC GCATCGCCCG TGCGGTCAAG GCCTGGACGA CCCGGGGCGA TGCCTGCGGC
CGGGTCTGGC GGCCCGGCGA CGTGCTGATC CTCGTGCGCA AGCGCTCGGC CGCCTTCGAG
GAGGTGATCC GCGCGCTCAA GGGGCTCGGC GTGCCGGTGG CGGGTCAGGA TCGGCTGGAG
GTCGCCGGGC ACATCGCCGT GCTCGACCTC GTCGCGGTCG GCCGCGCCGG GCTCCTGCCC
GCCGACGACC TGACGCTCGC CACCGCCCTC AAGACGCCGC TGGTCGGGCT CACCGACGAC
GACCTCACCC GGATCTGTGC CCGCCGGCCG TTCTCCGAGA CGCTGGAGGA TGCGCTGACC
CGCCACGCGG AGGCCGGCGA TGCGGCTGCG ATCCGCGGCC TGGCGGCGCT GCGGCTGTGG
ATCCGCCTCG CGGCGGAGAA CGGCCCCTTC GGCTTCTACG CCGCCCTGCT CGGCCCGCAT
GGCGGGCGCA GCCGGCTGGT GGCGCGGCTC GGCGGCGAGG CGGGCGACGC CATCGACGTG
TTCCTCGCCC AGGCGGCCGA GGCCGAGACC GGGGGCGACG CCCCCTGCCT CGAAGCGTTC
CTGGCCGATT ACGTGGTGCG GCCCGGCCGC GGCAGGAGCG GCCTCTCGGT CAAGCGCGAC
CTGGAGGCCG GCCGCGACGA GGTGCGGGTG ATGACGGTGC ACGGCGCCAA GGGCCTGGAG
GCCCCGGTCG TCGTCGTCAT CGACGGCTGC GAGCCGCTCG GCCGCAATGA TCCGCCGCTG
CTCGGCCTCG ACCCCGCCGC CGACGGCCCG CTGCCGCCGG TCTGGACCGG GGGACGCACC
CAGGATTGCG CGGCGACGCT GGCCGCCCGC TCCGCGCTCC AGGCGCGGGC GCGCGAGGAG
CATAACCGCC TGCTCTACGT CGCCATGACC CGGGCCGCCG ACCACCTCGT CATCGCCCCC
TATCGCGGGG CGACGCGGGA GACGCCGGCC TCATGGTGCG AGATGGTCCG CATCGGCCTG
GAGCGGGGGT TGGGGCCCGG CGAGGCGATC GAGACCGAGC ACGGGCCGAT CACGATCTGG
CGCGACGGCT CGGCCGCGTC GCTGGCCGCG GCGGCGGAGG CCACGGCCCT GCCGGAGCCC
GAGGCGGTGC CGGACTGGCT GTTCTCGAAC GCCGCGCCGG AGGCCGAGGC GGCGCCCCCG
CTGAGTCCCT CGGGCGCCCT CGGTGCCGCG GACGGGCAGC GCCAGCCGCA GCGCCGCCTG
GGGGATGCCG AGGCGCGCCG CCGCGGTGCC CTGGTCCACG CGCTCCTCGA ACACCTGCCG
CGGATCGAGC CGGCCCGCCG CGCCGAGGCT GCCGAGCGCT TCACCCGCGC CCGGGCGCCG
GCCCTGGACG AGGGCAAGCG CACGGATCTC GTGCGCTCCG TGCTGCGGCT GATCGAGACG
CCCGACCTCG CTCCGCTCTT CTCGGCGCAG GCACGGGCCG AGGTGGCGCT CTCGGGTCGG
ATCGTGGTGG ACGGCGTGGA ACGCGATGTC ACCGGCCGGA TCGACCGGCT CGTCGTCGAG
GACGGCCGGG TGATCCTGTG CGACTTCAAG ACCGGCCGCC CGCCCGCGGA CGACGCGCCG
CTTCCCGAGC GCGAGGCGGC GCAGGTCGCC CTCTACGCCC GGCTCGCCGC AGCGATCTGG
CCGGATCACG CGATCACCGC CCTGCTCGTC TGGACCTCGG GGCCGGTGGT GCGGCGGGTG
GAGGGATCGC GGCTCGGGCT CTGA
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| Protein sequence | MNAPLTGFTV DDLTKAAQRR AADPRLSAWV SANAGAGKTK VLTDRVLRLL LDGAPPGRIL
CLTFTKAAAA NMSIRVFQRL GRWVTLDDAA LTAELIELTG ERPARDTLRL ARRLFARAVE
TPGGLKIETL HALCERLLHM FPFEANVPAR FVVLDDNQSR EAFEIETDNV LADAFLGNDQ
TLSDAFAVVG AEASGDTLRE AIRAAMRTRA LFSDHRALEP ALARLPRALA LADGASVATI
ERAILEGSTL GDWRAVAGRL RTGKATDERL ADGLVEADAA LEAGKALAPY RSVFFTDKDE
PRAAKSFGTK AVPEEVKQAL LDEQARLIPL FDSLRAARAL ARTQGLFRLA AEIHRRVEAQ
KTRLGALDFD DLIHKTLDLL SRVGASWVLY KLDRGVDHVL VDEAQDTNPQ QWEILRTLTA
EFAAGEGARG LTRTRFAVGD PKQSIYSFQG ADPREFELTR RAWERAAKGA ELDFADVSLR
LSFRTASHVL AAVDAVFRVP EHFAGLSFEA GTPGTVHASA RAGVPGAVEL WGIEEPAEAE
EPDAWAAPVD APEPNAPAIV TARRIARAVK AWTTRGDACG RVWRPGDVLI LVRKRSAAFE
EVIRALKGLG VPVAGQDRLE VAGHIAVLDL VAVGRAGLLP ADDLTLATAL KTPLVGLTDD
DLTRICARRP FSETLEDALT RHAEAGDAAA IRGLAALRLW IRLAAENGPF GFYAALLGPH
GGRSRLVARL GGEAGDAIDV FLAQAAEAET GGDAPCLEAF LADYVVRPGR GRSGLSVKRD
LEAGRDEVRV MTVHGAKGLE APVVVVIDGC EPLGRNDPPL LGLDPAADGP LPPVWTGGRT
QDCAATLAAR SALQARAREE HNRLLYVAMT RAADHLVIAP YRGATRETPA SWCEMVRIGL
ERGLGPGEAI ETEHGPITIW RDGSAASLAA AAEATALPEP EAVPDWLFSN AAPEAEAAPP
LSPSGALGAA DGQRQPQRRL GDAEARRRGA LVHALLEHLP RIEPARRAEA AERFTRARAP
ALDEGKRTDL VRSVLRLIET PDLAPLFSAQ ARAEVALSGR IVVDGVERDV TGRIDRLVVE
DGRVILCDFK TGRPPADDAP LPEREAAQVA LYARLAAAIW PDHAITALLV WTSGPVVRRV
EGSRLGL
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