| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4873 |
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| Symbol | |
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| ID | 6310988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5205432 |
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| End bp | 5207195 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642653553 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_001927504 |
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| Protein GI | 188584059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.518263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0810929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATGC GGAACCAGTT CCTGGCGGCG GTGGGGCTCG CCGCCCTCAG CGTCGGCCTC
GCCCTTCCCG CGATCGCCGA GGTGACCGAG CAGGACATCC TCAACGACGC CAAGACGCCC
GAAGACGTCG TCACCTACGG CCTCGGCCCG CAGGCACAGC GCTTCAGCTC GCTCAAGACG
CTCAACCGTG AGAACATCAA GGGCCTCGTC CCGGCCTGGT CGTTCTCCTT CGGCGGCGAG
AAGCAGCGCG GCCAGGAGAG TCAGGCGCTG GTCAAGGACG GCGTGCTCTA CGTCACCGGC
TCCTATTCGC GCCTCTACGC CGTCGATGCG CGCACCGGCG AGAAGAAGTG GGAATACAAC
GCCCGCCTGC CCGAGGGCAT CCTGCCCTGC TGCGACGTGG TGAACCGCGG CGCCGCGCTC
TACAAGGACA AGGTCTATTT CGGCACGCTC GACGCCAAGC TCGTCGCGCT CGACCAGAAG
ACCGGCAAGG TCGTCTGGCG CAAGGACATC GACGACTTCA AGTCCGGCTA CAGCTACACC
GCCGCGCCGA TGATCGTGAA GGGCAAGATC ATCACCGGCG TGTCGGGCGG CGAGTTCGGC
GTGGTCGGCC GCGTCGAGGC GCGCGATGCC GAGACCGGCG AGATCGTGTG GAAGCGCCCC
GTCATCGAGG GCCATATGGG CGAGCTGAAC GGCAAGCCCT CGACCATGAC CGGCAAGACC
AACGAGACTT GGCCCGGCGA CACCTGGAAG TTCGGCGGCG GCGCCACCTG GCTCGGCGGC
ACCTACGATC CCGAACTGAA CCTGATCTAT TTCGGCACCG GCAATCCGGG TCCGTGGAAC
TCGGCCCTGC GCCCGGGCGA CAACAAGTGG TCGGCCTCGA GGCTGGCCAT CAACCCCGAC
AACGGCGAGA TCGTTTGGGG CTTCCAGACC ACGCCGCATG ACGGCTGGGA CTACGACGGC
GTCAACGAGT TCGTGCCCTT CGACATGCAG AAGGACGGCA AGACCGTGAA GGCCGGCGCC
ACCGCCGACC GCAACGGCTT CTTCTACGTC CTCGACCGGA CCAACGGGGC GTTCCTGTCG
GCCACGCCGT TCGTGTCCAA CATCAACTGG GCCAAGGGCA TCGACGAGAA CGGCCGCCCG
ATCTACGACG AGGCCAACCG CCCCGGCGAC CCGGCCAAGT CCGAGGACGG CAAGAAGGGC
AAGTCGGTCT ACGCCACGCC GGGCTTCCTC GGCGGCAAGA ACTGGAACCC GATCGCCTAC
AGCCCCGACA CGAAGCTGTT CTACGTCCCC TCCAACGAGT GGGGCATGGA CATCTGGAAC
GAGCCGGTGA ACTACAAGAA GGGCGCCGCC TATCTCGGCG CGGGCTTCAC CATCAAGCCG
ACCTTCGAGG ACCATATCGG CTCGCTCAAG GCGATCGACC CGGCGACCAA GAAGGTCGTG
TGGGAGTACA AGAACAAGGC CCCGCTCTGG GCCGGCGTGC TCACCACCGC GGGCAACCTC
GTCTTCACCG GCACCCCCGA GGGCTTCCTG AAGGCGTTCG ACGCCAAGAC CGGCGAGGAA
GTCTGGAAGT TCCAGGTCGG CACCGGCGTC GTCGCCTCGC CGATCACCTG GGAGCAGGAC
GGCGAGCAGT GGATCGGCGT CGCGGCCGGC TGGGGTGGCG CGGTGCCGCT CTGGGGCGGC
GAGGTCGCCA AGACCACCGC CGGCATCAAC CAGGGCGGCA GCTTCTGGGC CTTCCGCCTG
CCGAAGGCCC TCGCCTCTCG CTGA
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| Protein sequence | MRMRNQFLAA VGLAALSVGL ALPAIAEVTE QDILNDAKTP EDVVTYGLGP QAQRFSSLKT
LNRENIKGLV PAWSFSFGGE KQRGQESQAL VKDGVLYVTG SYSRLYAVDA RTGEKKWEYN
ARLPEGILPC CDVVNRGAAL YKDKVYFGTL DAKLVALDQK TGKVVWRKDI DDFKSGYSYT
AAPMIVKGKI ITGVSGGEFG VVGRVEARDA ETGEIVWKRP VIEGHMGELN GKPSTMTGKT
NETWPGDTWK FGGGATWLGG TYDPELNLIY FGTGNPGPWN SALRPGDNKW SASRLAINPD
NGEIVWGFQT TPHDGWDYDG VNEFVPFDMQ KDGKTVKAGA TADRNGFFYV LDRTNGAFLS
ATPFVSNINW AKGIDENGRP IYDEANRPGD PAKSEDGKKG KSVYATPGFL GGKNWNPIAY
SPDTKLFYVP SNEWGMDIWN EPVNYKKGAA YLGAGFTIKP TFEDHIGSLK AIDPATKKVV
WEYKNKAPLW AGVLTTAGNL VFTGTPEGFL KAFDAKTGEE VWKFQVGTGV VASPITWEQD
GEQWIGVAAG WGGAVPLWGG EVAKTTAGIN QGGSFWAFRL PKALASR
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