Gene Mpop_4870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4870 
Symbol 
ID6310985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5202416 
End bp5203642 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content73% 
IMG OID642653550 
Producthypothetical protein 
Protein accessionYP_001927501 
Protein GI188584056 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.128964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC GGCTCGGGAC ACGGCAGGGC GGCCCTCTCC GGGTGACGCC GCCGCGGCGC 
AGGACGCGCG GCGTCGGCCT GATCCTGCTC GGTCTGCTGG CCCTCCCGGC GCAGGCCGAG
CCGCTGGCGA TCCACTATCT CGAGCGGCGC ATCGAGCGCC CGACGCCCCT CAACAACGAA
GACCCGATCC CCGACGACGA GGGGCTGAAG GGCGCCGAAC TCGGGCTGAA GGATTCGAAC
GCCACCGGCC GCTTCGTCGC CCTGAAATTC ACCCTCGACA GCCGCGTCGT CGAGCCCGGT
GAGGATCTTC GCGCCGCGTT CCGCGCCCTC GGCGAGCGGC CCCGCTTCGT CGTGCTGAAC
GCGCCCGCCG AGGACGTGCT GGCGCTCGCC GACATGCCCG AGGCCAAGGG CACCGTGTTC
CTCAATGTCG GCGCGCCGGA TTCACGCCTG CGCGAGGCCG ATTGCCGGCC GCGCCTGCTC
CACGTCCTGC CTTCGCGGGC GATGCTTGCC GATGCACTGG TGCAGTTCCT CGCCTACAAG
CGCTGGACCC GCATCCTGCT GCTCTCCGGC CCGGCTCCGG CGGATGCCCT CTATGCCGAG
GCCCTGAAGA CGAGCGCCAA GAAGTTCGGC GCGCGGATCG TCGCCGAATC CCGCTTCGAC
CCGCAGGGGG GCGACACCCG CGACACGGCG CTGCGCGAAT TCGTGCTGCC CACCCGCGGT
CCCGAGCACG ACGTGGTTGC GGTCGCCGAC GAGGCCGGGG CGTTCGGGGC GAACCTCGTC
TACAACACCG CCGCGGCGCG TCCGGTCATC GGCACGCAGG GGCTCACGCC GGCCGCCTGG
GGCCGCCCGG TCGAGGCCTG GGCGGCGGTG CAGCTCCAGA GCCGGTTCCG CCGCCTCGCC
GGCCGGGCGA TGCGCCCGAT CGATTATGCC GGCTGGATGG CGGTGCACGC GCTCGGCGAG
GCGGCGGTCC AGGCGCGCAG CACCGATTCC GACACCGTGG CGGCACTCGT GCTCTCGCCA
CGCTTCGAGG TCGGCGGCTT CAAGGGGCGG CCCCTGAGCT TCCGCGCCTG GGACGGACAG
TTGCGACAGC CCGTCTTCCT GCTCTGGCCG GGCGCGGTGA CCGCTACCGC CCCGATCGAG
GGCTTCCTGC ATCACCGCAC CGAACTCGAC ACGCTCGGCC CCGACGAGCC GGAGAGCGCG
TGCCGGGCTT TTCGGAAGCC GGGCTGA
 
Protein sequence
MLARLGTRQG GPLRVTPPRR RTRGVGLILL GLLALPAQAE PLAIHYLERR IERPTPLNNE 
DPIPDDEGLK GAELGLKDSN ATGRFVALKF TLDSRVVEPG EDLRAAFRAL GERPRFVVLN
APAEDVLALA DMPEAKGTVF LNVGAPDSRL READCRPRLL HVLPSRAMLA DALVQFLAYK
RWTRILLLSG PAPADALYAE ALKTSAKKFG ARIVAESRFD PQGGDTRDTA LREFVLPTRG
PEHDVVAVAD EAGAFGANLV YNTAAARPVI GTQGLTPAAW GRPVEAWAAV QLQSRFRRLA
GRAMRPIDYA GWMAVHALGE AAVQARSTDS DTVAALVLSP RFEVGGFKGR PLSFRAWDGQ
LRQPVFLLWP GAVTATAPIE GFLHHRTELD TLGPDEPESA CRAFRKPG