Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4782 |
Symbol | |
ID | 6310272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5109789 |
End bp | 5111651 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642653461 |
Product | ABC transporter related |
Protein accession | YP_001927413 |
Protein GI | 188583968 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.372131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG TCAACGATCT CACCTACCGC ATCGGCGAGC GGGTCATCCT CGATTCGGCC ACCTTCGCCA TTCCCGACCG GGCCCGCGTC GGGCTGGTCG GCCGCAACGG GGCGGGCAAG ACCACCCTGT TCCGGGCGAT CCTCGGCGAC TTGCCGACCG ATGCCGGGGC GGTCTCGATC CCGAAGGGCA TGCGCATCGG CGCGGTGGCC CAGGAAGCGC CCGCCGGCCC CGAGACCCTG CACGAGGTGG TGCTCGCCGC CGACCTCGAA CGCGCCCGGC TGATGCGCGA GGCGGAAGGG GCCGACGGCC TGCGCCGGGC GGAGATCGAG ACCCGGCTCG TCGATATCGG CGCGCATTCG GCCCCGGCCC GCGCGGCGGC GATCCTGCAC GGCCTCGGGT TCGACGCGGC GGCGCAGGCG CGGCCCTGCT CGGACTTCTC CGGCGGCTGG CGGATGCGGG TGGCGCTGGC CGCGATCCTG TTCTCCGAGC CCGATCTGCT GCTTCTCGAC GAGCCGACCA ACTACCTCGA CATCGAGGGC ACGCTCTGGC TCTACGACTA TCTCGAAAAG TACCCGCGCA CGGCGATCAT CATCAGCCAC GACCGGGAAC TGCTCGACAC ATCCGTCGAT CACATCCTCC ATCTCGACCG CGGCAAGCTC ACGATCTACC GCGGCGGCTT CACCAGCTTC TCGCGCCAGC TCTCCGAGAA GCGGGTGCTC CAGGCCAAGG CGAAGGCCAA GCAGGACGCC GAGCGGGCGC ACCTGCAAAG CTTCATCGAC CGCTTCAAGG CCAAGGCGAC CAAGGCGCGC CAAGCCCAGT CGCGGATGAA GCGACTCGCC AAGATGGAGC CGATCGCCGC CCTCCTCGAG GACGAGGCTC CGGTGATCCA TCTGCCGAGC TCGGAAAAGC CGCTCTCGCC GCCGATCGTC GCCATGGAGC GGGTCCAGGC CGGCTACGGC GAGCGGATCG TGCTCTCGGG GCTCAACCTC TCGCTCGCTC CCGATGACCG GGTGGCGCTC CTGGGTGCCA ACGGCAACGG CAAGTCGACC TTCTGCAAGC TGATCGGCGG ACGGCTTCCA CCCTTGGCGG GCGAATTGAA GCGCTCCTCC AAGATGGAGG TCGCTTATTT CGCCCAGCAC CAGCTCGACG AGCTGCGCCC GTCCGAGAGC GCGGTGGCGC ATGTGCGCGA CCGGATGCCC GATGCGCCGG AGGCGAAGGT GCGCTCGGCC GCCGCGCGCC TGGGCTTTCC CGCGTCGAAG GCCGACACGC CGGTGGAGAA GCTCTCCGGC GGCGAGAAGG CGCGGCTCTT GATGGGGCTC GCCGCCTTCG ACGGGCCGCA CCTCCTGATC CTCGACGAGC CCACCAACCA CCTCGACATC GAGAGCCGGC AGGCGCTGGT CGAGGCGATC AACGACTACG AGGGGGCCGT CATCCTCGTC TCCCACGACC GCTTCCTGAT CGAGGCCTGC GCCGACCGGC TCTGGATCGT CGGCAACGGC TCGGTGACGA CGTTTGACGG CGACATGGAC GACTATCGCC GCCTCGTGCT CGCCGGCCCG GAGCGGGTGG AGACGACGGG CGAGGGCACC GGCGGCCAGA AGGCCGAGGC GCGCCGCTCC GCGGTGGAGC GGCGCGCGGC GCTGGCGCCG CTCAAGAAGC GACTCGAGAC GATCGAGGCG CGGATGGCCA AGCTCTCGGG GGCGATCGAG AAGATCGACG CGGCATTGGC CGACGGCACC GCCTTCCTCA AGGACGCGGC CAAGGCCGGC GACCTCGCCC GGATGCGCGC CGAGGCCGCC GAGGCTTTGG CCAAAGCCGA GGAGGAGTGG CTGGAGGTCA GCGGTGAGAT CGAGGCGGCC TGA
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Protein sequence | MLRVNDLTYR IGERVILDSA TFAIPDRARV GLVGRNGAGK TTLFRAILGD LPTDAGAVSI PKGMRIGAVA QEAPAGPETL HEVVLAADLE RARLMREAEG ADGLRRAEIE TRLVDIGAHS APARAAAILH GLGFDAAAQA RPCSDFSGGW RMRVALAAIL FSEPDLLLLD EPTNYLDIEG TLWLYDYLEK YPRTAIIISH DRELLDTSVD HILHLDRGKL TIYRGGFTSF SRQLSEKRVL QAKAKAKQDA ERAHLQSFID RFKAKATKAR QAQSRMKRLA KMEPIAALLE DEAPVIHLPS SEKPLSPPIV AMERVQAGYG ERIVLSGLNL SLAPDDRVAL LGANGNGKST FCKLIGGRLP PLAGELKRSS KMEVAYFAQH QLDELRPSES AVAHVRDRMP DAPEAKVRSA AARLGFPASK ADTPVEKLSG GEKARLLMGL AAFDGPHLLI LDEPTNHLDI ESRQALVEAI NDYEGAVILV SHDRFLIEAC ADRLWIVGNG SVTTFDGDMD DYRRLVLAGP ERVETTGEGT GGQKAEARRS AVERRAALAP LKKRLETIEA RMAKLSGAIE KIDAALADGT AFLKDAAKAG DLARMRAEAA EALAKAEEEW LEVSGEIEAA
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