Gene Mpop_4717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4717 
Symbol 
ID6312506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5036302 
End bp5037477 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID642653395 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_001927348 
Protein GI188583903 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00393654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAGCC GCACCGGACG ACACTTCCTG CACATTCCAG GCCCGAGCCC GGTGCCGGAG 
CGCGTGCTGC GCGCCATGGA CCGGCAGGTG ATCGACCATC GCGGGCCGGA ATTCGGCGTG
CTCGGCCGCG AGGTGCTGGA GGGTTGCCGC ACGATCTTCC GCACCAAGGG GCCGGTGGTG
ATCTATCCGG GCTCGGGCAC GGGGGCCTGG GAGGCGACCA TCGTCAACAC GCTCTCCTCG
GGCGACCGTG TCCTGATGTT CGAAACCGGC CATTTCGCCA CCCTGTGGCG GCAGATGGCG
GCGCGCTGGG GCATCGAGGT CGAGTTCGTG CCCGGCGACT GGCGCCACGG CGTCGATCCG
GCCGTGGTCG AGGCGCGGCT CGCCGAGGAC CGCGGCCACG CGTTCAAGGC GGTGATGGTG
GTCCACAACG AGACCTCCAC CGGCGTCACG AGCCGCATCC CGGCGATCCG CAAGGCGATC
GATGCGGCCG GGCACCCGGC GCTGCTGCTG GTCGACACCA TCTCCTCGCT CGGCTCGGTC
GATTACCGCC ACGACGAGTG GGGCGTCGAC GTCACCGTCA GCGGCTCGCA GAAGGGCCTG
ATGCTGCCGC CGGGCCTCGG CTTCACCGCG ATCTCGGACA AGGCGCGGGC GGCGGGCCGC
TCGAACAACC TTCCCCGGTC CTACTGGGAC TGGGAGGAGA TGCTGAAGCC CAACGCCAAC
GGCTACTTCC CCTACACGCC GGCCACCAAC CTGCTCTACG GCCTGCGCGA GGCGGTGGCG
ATGCTGCTGG AGGAGGGCCT CGACAACGTC TTCGCCCGCC ACCAGAGGCT GGCCGCCGCG
ACCCGCGCCG CGGTCGAGGC CTGGGGGCTC GAAGTGCTGT GCCGGAACCC GGACGAGTAC
TCGCCGGTGC TCACCGCGGT GATGATGCCC GACGGCCATG GCGCGGACGC CTTCCGCGCC
CTGGTGCTGG ACAAGTTCGA CATGTCGCTC GGCGCCGGCC TGTCGAAGCT GGCCGACAAG
ATCTTCCGCA TCGGCCATCT CGGCGAGACC AACGACCTGA CCCTGATGGG CGCCCTGTCC
GGCGTCGAAA TGGGCTTGGC GGCGGCCGGC GTGCCGCACC AACGCGGCGG CGTGCTCGCC
GCGATGGCGA GCCTGCGCTC CGGCCTGGAC GGCTGA
 
Protein sequence
MTSRTGRHFL HIPGPSPVPE RVLRAMDRQV IDHRGPEFGV LGREVLEGCR TIFRTKGPVV 
IYPGSGTGAW EATIVNTLSS GDRVLMFETG HFATLWRQMA ARWGIEVEFV PGDWRHGVDP
AVVEARLAED RGHAFKAVMV VHNETSTGVT SRIPAIRKAI DAAGHPALLL VDTISSLGSV
DYRHDEWGVD VTVSGSQKGL MLPPGLGFTA ISDKARAAGR SNNLPRSYWD WEEMLKPNAN
GYFPYTPATN LLYGLREAVA MLLEEGLDNV FARHQRLAAA TRAAVEAWGL EVLCRNPDEY
SPVLTAVMMP DGHGADAFRA LVLDKFDMSL GAGLSKLADK IFRIGHLGET NDLTLMGALS
GVEMGLAAAG VPHQRGGVLA AMASLRSGLD G