Gene Mpop_4707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4707 
Symbol 
ID6312573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5025215 
End bp5025925 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content75% 
IMG OID642653385 
ProductdTMP kinase 
Protein accessionYP_001927338 
Protein GI188583893 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0191437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG ATGCGCCCCG GGGCGTCTTC ATCACCTTCG AGGGCGGGGA GGGGGCGGGC 
AAGTCCACCC AGATCGCGCG CCTCGCCGCG ACCCTGCGCG ACGAGGGAGG CGGGCGCGAA
GGACGCGGGC GCGAGATCGT GACCACCCGC GAGCCCGGCG GCACGCCGCG CGCCGAGGCG
CTGCGCGCGG CTCTGCTGCG GGGCGTGGCC AAGCCCTACG GGCCTTTCGC CGAGGCGCTG
ATGTTCGCCG CCGCCCGCAT CGATCACATC GAGAACCGGA TCCGGCCGGC GCTCGCCCGC
GGCGCGATCG TGCTGTGCGA CCGCTTCTCC GATTCGACCC GCGCCTATCA GGGCGCGGCC
GGGGGCCTGG AACCGGAGTT GATCGCGAGC CTGGAGCGGG TGACGCTCGG GGATCTGCGC
CCCGACCTCA CCCTGATCCT CGACCTGCCG CCCGAGGCCG GGCTCGCCCG GGCGCAAAGC
CGCGGCGGGG GCGAACCCGC CGACCGCTTC GAGGCGGAGG GCATGCGGTT CCATCAGCGC
CTGCGGACCG CCTTCCGCGC CATCGCCGAG GCCGAGCCGG AGCGCTGCCG GATCATCGAC
GCGGATCTCG GCCCCGATGC CGTGGAAGCC GCCATCCGCG CGGCCGTCGC GGCATGGCGG
CCGGATCTTC TGTCTGCGGC GGCGGGGGAG GGCCACGACC ATGCCGCCTG A
 
Protein sequence
MSSDAPRGVF ITFEGGEGAG KSTQIARLAA TLRDEGGGRE GRGREIVTTR EPGGTPRAEA 
LRAALLRGVA KPYGPFAEAL MFAAARIDHI ENRIRPALAR GAIVLCDRFS DSTRAYQGAA
GGLEPELIAS LERVTLGDLR PDLTLILDLP PEAGLARAQS RGGGEPADRF EAEGMRFHQR
LRTAFRAIAE AEPERCRIID ADLGPDAVEA AIRAAVAAWR PDLLSAAAGE GHDHAA