Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4654 |
Symbol | |
ID | 6308960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4967414 |
End bp | 4969555 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642653332 |
Product | ABC transporter domain protein |
Protein accession | YP_001927285 |
Protein GI | 188583840 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.435698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAGCG GGAAGGATAT CGTTTTGACC GCATTCAAGA GCGGGCTCGG GGCGCAAGCC GCGCTGACCG CACTCGTCGC GCTGCTCCTC CTCTCCGTTC CCGGCACACC GCCGCCGCTC TACGTCTCGC TCGGAGGCTT CGCGATGGCC GGCCTCCTGT TGGCCGCGCG ACGCCTTTCG GCCTTCCTGA AGGTCTTCGT CTCAGTCTAC GGCATCGGCT ACCTCGTCCT CGCCCTCGCC AAACAAGCCG CGCTGCTGGC ATTGCTGCCT GCACCGGTGG CGGACCTGCT GCCGCCAGAC TTCGCCGCCA CCGGTGCCGT CGTGTTCGCC GGCATCGTGC TGGCGATGTC CCGTCTCGCC CCGATCCGCG CGATCACGCG GATCGCCGAC CCGTACTTCG AGAGTCGCGA CGCACCGATC CAGGAGATCG GCATGTTCCG CTTCCTGGGC CGGGCCGAAG GCGAAATCGG CCGGCGCCTC GTGGCGCTCT CTATCTTCAT CACCTTCGCT CAGGTCGCCC TGCAGCTTCG CCTGAATTTC TGGCACCGCG ACCTGTTCAA TGCGCTGCAG GAGCAGCAGG CCGACGTCTT CTGGTATCAG CTCGTCGGAG TGTTCCTTCC GCTGGCCACC CTATGGGTGA TCCTCGGCAT GCTCGATGTC TTCGTGGACG CGAGCCTGCA GATCCGCTGG CGCACATGGC TGACCCGCAG CCTCTACGAG CGCTGGCTCG CAGGTGGAAC GCACTACCGA ATCCCCTACA CGGGCGAGGA CGCGGACAAT CCGGACCAGC GCATCCAGAG CGACGTCAAC ATGTTCATCA AGCAGACGAT GATGCTCTCG ATCCGCCTGC TCTCGCAGGC CGCCACGCTG GTCTCCTTCA TGATTATCCT GTGGGGCCTG TCGCGCGACT TCGTCCTGCC GCTCTTCGGC ACGGTGGTCC CGGGCTTCCT GGTCTGGTTC GTGATTGGCT ACGCCGTCGT CGGCACATGG CTGGCCCACA TCATCGGTCG CCCTCTCATC GGGCTCGATT TCCAGCAGGA GAGGGCGGAG GCGGATTTCC GGTTCTCACT CGCCCGCTCA CGTATCTATT CCGAGCAGAT TGCGCTGCTG CGGGGCGAGC GCGCCGAGAC GATACAGTTG TCGAATCTCT TCAGCTCGAT CGTCGAGAAC TACGTCAGTA TCATCTACAG GCGGCTCAAG CTCGGCGGCT TTACATTCTC TTACACTCAG CTAAGCGTCG TGTTCCCGTA CATCCTCGCC GCTCCGGCCT ACTTCGCCAA GGCAATCACT CTGGGGCAAT TTCGGCAAAC CGGTGACGCT TTCACCGGTG TGCAATCATC GCTCTCGTTC TTCATCCAAT CCTACGACGT GATCGCGGCC TACAAGGCGA ACACAGATCG TCTCGCCTCG TTCGATCATG CGATGACCCG GGCCGAGTCC CTTGGAAGGG GCGGTCATGG CCTCGTATAC GGCAACGACA CCCGCGACGA CGTCACCGTG CGGGATCTGG TCTTAAGCTT GCCGGACGGC CGTGAGATCG TGCGGATCGG CTCCCTGACC CTACCGAAGG GGCGCGCCAC GTTGGTGACC GGCCCCTCGG GTTCAGGCAA GTCGACCCTG TTTCGGGCGA TGGCCGGGAT CTGGCCCTTC GGCCAGGGTC GGATCGACGT GCCGCCGGAC CAATCGGCCA TGCTGCTGCC GCAGCGTCCC TACCTTCCGC TCGGTTCTCT GCGCAGCGCG GTGGTCTATC CGAACACCGC CGGACGGTTC TCCGACGCGG CGATCCGTGA GGTGCTTGTC GCCACCCAGC TATTTCACCT CGCCGATTGT CTCGACGAGG TCGACGCCTG GGACCGGTGC CTCTCCGGCG GTGAGCAGCA GCGGCTCGCG ATGGCGCGTG CCATTCTGGC CCAGCCCGCT TGGCTCTTCC TCGACGAGGC GACGGCGGCG CTCGACGAGC CAAGCGAGGC CCATCTCTAC GAGATGCTCC GCGCGCGGTT GCCCGACACG ACGATCGTGT CGATCGGTCA TCGCTCCACC CTGCTCCGGC ACCATGACCA TCGCATCGAC CTGACACCGA GCGCGAGCCG CCGTTTTTCC ATCCGCGACC GCGGAACGCC ACTCTCAGCT TCGTCGAGCT AG
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Protein sequence | MASGKDIVLT AFKSGLGAQA ALTALVALLL LSVPGTPPPL YVSLGGFAMA GLLLAARRLS AFLKVFVSVY GIGYLVLALA KQAALLALLP APVADLLPPD FAATGAVVFA GIVLAMSRLA PIRAITRIAD PYFESRDAPI QEIGMFRFLG RAEGEIGRRL VALSIFITFA QVALQLRLNF WHRDLFNALQ EQQADVFWYQ LVGVFLPLAT LWVILGMLDV FVDASLQIRW RTWLTRSLYE RWLAGGTHYR IPYTGEDADN PDQRIQSDVN MFIKQTMMLS IRLLSQAATL VSFMIILWGL SRDFVLPLFG TVVPGFLVWF VIGYAVVGTW LAHIIGRPLI GLDFQQERAE ADFRFSLARS RIYSEQIALL RGERAETIQL SNLFSSIVEN YVSIIYRRLK LGGFTFSYTQ LSVVFPYILA APAYFAKAIT LGQFRQTGDA FTGVQSSLSF FIQSYDVIAA YKANTDRLAS FDHAMTRAES LGRGGHGLVY GNDTRDDVTV RDLVLSLPDG REIVRIGSLT LPKGRATLVT GPSGSGKSTL FRAMAGIWPF GQGRIDVPPD QSAMLLPQRP YLPLGSLRSA VVYPNTAGRF SDAAIREVLV ATQLFHLADC LDEVDAWDRC LSGGEQQRLA MARAILAQPA WLFLDEATAA LDEPSEAHLY EMLRARLPDT TIVSIGHRST LLRHHDHRID LTPSASRRFS IRDRGTPLSA SSS
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