| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4648 |
|---|
| Symbol | |
|---|
| ID | 6308954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4961186 |
|---|
| End bp | 4961899 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642653326 |
|---|
| Product | protein of unknown function DUF161 |
|---|
| Protein accession | YP_001927279 |
|---|
| Protein GI | 188583834 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.422653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG TGCATCGGAC GGTCCCGGCG ACGGCGCTGA ACAGCGCGAT CCTGCACAGG
CATGCGCTGC ACGAGGACGT GCTGGCCATC TTCACCGGTG CCTGCCTCAT CTCGCTCGGC
GTCGTGATCC AGGCTCAGGC GCAACTCCTG TCCGGCGGCA TCGCCGGGCT GTCGATGTTC
GTTGCGCGTC TGGCCCCGGT CGGATTCTGG ATCGCGTTCT TCGTCTTCAA TCTTCCCTTC
TGCGCTCTTG CGTGGCGGAG GGGGGCCGGG TTCGTGGTCA GAACCCTGCT CGCTGTGACG
CTCACGGCCG CGCTGACCGA ACGGACCGCG GTCTGGACCG GCTTCGCCAC GATCAATCCG
ATCTACGCCG CCGTCGCGGG CGGGGCACTG ATCGGCATCG GGCTGATCGT GCTGTTCCGC
CACGGCACCA GTCTCGGCGG CTTGAGCATC CTCGCCCTGT ACCTGCAGGA TCGCGTCGGC
ATCCGCGCAG GCTATGTGCA GATGGCCTTC GACGCAGCGC TCCTGCTCAT CGCCTCTTCG
GTCCTACCGG CCTGGAACCT GGTCCTTTCG GTACTCGGCA TGCTCACGGT CAACGCGGTG
ATCGCGGCGC ATCATCGTTC GGACCGGTAC GTCGGCGTCA CCGGCCGGGA TCGTCCCCGA
ACAGGCTCGG CGCCGGCACG GCAGGCGCTC TATGGCCACG GAAAGGATTC TTGA
|
|---|
| Protein sequence | MNRVHRTVPA TALNSAILHR HALHEDVLAI FTGACLISLG VVIQAQAQLL SGGIAGLSMF
VARLAPVGFW IAFFVFNLPF CALAWRRGAG FVVRTLLAVT LTAALTERTA VWTGFATINP
IYAAVAGGAL IGIGLIVLFR HGTSLGGLSI LALYLQDRVG IRAGYVQMAF DAALLLIASS
VLPAWNLVLS VLGMLTVNAV IAAHHRSDRY VGVTGRDRPR TGSAPARQAL YGHGKDS
|
|---|
| |