Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4632 |
Symbol | |
ID | 6313275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4944195 |
End bp | 4946075 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642653311 |
Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
Protein accession | YP_001927264 |
Protein GI | 188583819 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.271906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGGT TTGTGACATC GGTCTCGGCC CTGGCGATGC TGGCGCTCGC GCCGGCCGCG CTGTCGAGCG CGGCTTACGC CAACGACAAG CTCGTCGAGC TGTCGAAGAG CGACGAAAAC TGGGTGATGC CCGGCAAGAA CTACGACTCG AACAACTACA GCGAGTTGAA GCAGATCAAC AAGAGCAACG TGAAGCAGCT CCGGCCGGCT TGGACGTTCT CGACCGGTCT GCTGAACGGC CACGAGGGCG CGCCGCTCGT CGTCGACGGC AAGATGTACA TCCACACCTC GTTCCCGAAC AACACCTTCG CCCTCGGCCT CGACGATCCG GGCACGATCC TGTGGCAGGA CAAGCCGAAG CAGAACCCGG CCGCCCGCGC GGTGGCCTGC TGCGACCTCG TGAACCGCGG CCTCGCCTAC TGGCCCGGCG ACGGCAAGAC CCCGGCGCTG ATCCTCAAGA CCCAGCTCGA CGGCAACGTC GCGGCGCTCA ACGCCGAGAC CGGCGAGACG GTGTGGAAGG TCGAGAACTC CGACATCAAG GTCGGCTCGA CGCTCACCAT CGCCCCCTAC GTCGTGAAGG ACAAGGTGAT CATCGGCTCC TCGGGCGCCG AGCTCGGCGT GCGCGGCTAC CTCACCGCCT ACGACGTGAA GACCGGTGCG CAGGTGTGGC GCGCCTACGC CACGGGTCCG GACAAGGACC TGCTGCTGGC CGACGACTTC AACGTCAAGA ACGCCCATTA CGGCCAGAAG GGCCTCGGCA CCGCCACCTG GGAGGGCGAT GCCTGGAAGA TCGGCGGCGG CACCAACTGG GGCTGGTACG CCTACGATCC GGGCACCAAC CTGATCTACT TCGGCACCGG CAACCCGGCG CCGTGGAACG AGACCATGCG TCCCGGCGAC AACAAGTGGA CGATGACGAT CTTCGGCCGC GACGCCGATA CGGGTGAGGC CAAGTTCGGC TACCAGAAGA CCCCGCACGA CGAGTGGGAC TATGCCGGCG TCAACGTGAT GATGCTGTCC GACCAGAAGG ACAAGGACGG CAAGTCCCGC AAGCTGCTGA CCCACCCGGA CCGCAACGGC ATCGTCTACA CGCTCGACCG CACCGACGGC TCGCTCGTCT CGGCGAACAA GCTCGACGAC ACGGTCAACG TGTTCAAGTC GGTCGACCTG AAGACCGGCC AGCCGGTGCG CGATCCGGAA TACGGCACCC GGATGGACCA CCTCGCCAAG GACATCTGCC CCTCGGCGAT GGGCTACCAC AACCAGGGCC ACGACTCGTA CGATCCGAAG CGTGAACTGT TCTTCATGGG CATCAACCAC ATCTGCATGG ATTGGGAGCC CTTCATGCTT CCCTACCGTG CGGGTCAGTT CTTCGTCGGT GCGACGCTGA ACATGTATCC GGGCCCGAAG GGCGACCGTC AGAACTACGA AGGTCTCGGC CAGATCAAGG CGTACAACGC GATCACCGGC GACTATAAGT GGGAGAAGAT GGAGCGCTTC GCTGTGTGGG GCGGCACCAT GGCCACCGCG GGCGACCTCG TCTTCTACGG CACTCTCGAC GGCTACCTGA AGGCGCGCGA CTCCGACACG GGTGACCTTC TCTGGAAGTT CAAGATCCCG TCCGGCGCCA TCGGCTACCC GATGACCTAC ACCCACAAGG GCACGCAGTA CGTCGCCATC TACTACGGCG TCGGCGGCTG GCCGGGTGTC GGCCTCGTGT TCGACCTCGC CGACCCGACC GCCGGTCTCG GCGCGGTGGG CGCCTTCAAG AAGCTCGCCA ACTACACCCA GATGGGCGGC GGCGTGGTGG TGTTCTCGCT CGACGGCAAG GGCCCCTACG ACGATCCGAA CGTCGGCGAG TGGAAGTCGG CCGCCAAGTA A
|
Protein sequence | MSRFVTSVSA LAMLALAPAA LSSAAYANDK LVELSKSDEN WVMPGKNYDS NNYSELKQIN KSNVKQLRPA WTFSTGLLNG HEGAPLVVDG KMYIHTSFPN NTFALGLDDP GTILWQDKPK QNPAARAVAC CDLVNRGLAY WPGDGKTPAL ILKTQLDGNV AALNAETGET VWKVENSDIK VGSTLTIAPY VVKDKVIIGS SGAELGVRGY LTAYDVKTGA QVWRAYATGP DKDLLLADDF NVKNAHYGQK GLGTATWEGD AWKIGGGTNW GWYAYDPGTN LIYFGTGNPA PWNETMRPGD NKWTMTIFGR DADTGEAKFG YQKTPHDEWD YAGVNVMMLS DQKDKDGKSR KLLTHPDRNG IVYTLDRTDG SLVSANKLDD TVNVFKSVDL KTGQPVRDPE YGTRMDHLAK DICPSAMGYH NQGHDSYDPK RELFFMGINH ICMDWEPFML PYRAGQFFVG ATLNMYPGPK GDRQNYEGLG QIKAYNAITG DYKWEKMERF AVWGGTMATA GDLVFYGTLD GYLKARDSDT GDLLWKFKIP SGAIGYPMTY THKGTQYVAI YYGVGGWPGV GLVFDLADPT AGLGAVGAFK KLANYTQMGG GVVVFSLDGK GPYDDPNVGE WKSAAK
|
| |