Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4552 |
Symbol | |
ID | 6313037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4857390 |
End bp | 4859561 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642653232 |
Product | ABC transporter related |
Protein accession | YP_001927185 |
Protein GI | 188583740 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTCTGC TGTCGGATCT TCAGTTCGGT TTCCGGCGGC GCCTGCCGGT CGTGCTCCAG GCCGAGGCCG CCGAGTGCGG CATGGCCTGC CTCGCCATGG TGCTGGGCTA TCACGGGCGC CGGGTCGATC TCGGAAGCTT GCGCGCCCGC CACGCCCTCT CGCTCAAGGG CATGACGCTG CGAAACCTCA TGGACCTGTC GGGCACGATG GGGCTCTCGA CGCGGGCGCT CCGGGTGGAG CTGACCGATC TCGGTCGTCT GCGCCTGCCC TGCATCCTGC ACTGGGGGCT CAACCACTTC GTCGTGCTGG CGCGGGTCGG GCGCCGGGAG ATCGTGATCC ACGATCCCGC CCGCGGGCGC CGACGTTTGA GCCTCGCGGA AGCCTCGCGG GACTTCACCG GCGTGGCGCT GGAGGTGAGC CCGAACCAGA GCTTCGTGCG CGAGCGGGCG GCGCGGGGGC TGGCCCTGTC CGACCTGTTC CGCGGCATGG CCGGCATCCG CTCGGCGATG ATCCAGATCC TGGCCCTGTC GCTCGGGATC GAACTCATCG CGATCCTGAT GCCGATCGCC TCGCAGATCG TCATCGACGA GGTGATCGTG AACGGCGATC TCGACCTGCT GCTCGTCGTC GCCCTCGGGC TCGCCCTGCT GCTGGTGCTG CAACTGGGGC TCGGCGTCGC CCGGAGCTGG GCGATCATGC TCACCGGCAC GGGGCTGAAC TACCAGTGGT CGGGCTCGCT GTTCGACCAC CTCTCCCGGC TGCCGCTGGA CTATTTCCAG AAGCGGCATG TCGGCGACGT GATCTCGCGC TTCGGCACGC TGGCCACGAT CCAGAAGGGC ATCACCACCG ACCTCGTCCA GGCGCTGCTC GACGGGCTGA TGTCGGTCGG CATGCTGATC ATGCTGTTCC TCTACGGCGG CTGGCTCGCC CTGGTGGCGC TCGCCGCCAC CGCCCTCAAC GCCGGCCTGC GCATCGCCGC TTACAAGGCG TACCGCGAGG GCACCGAGGA GGCGATCGTG GCGGAAGCGC GCCAGCAGAG CCACTTCATC GAGACCGTGC GCGGCATGGC GAGCGTCAAG CTCTTGAACC TGCGCGAGCG CCGCCGCGGC ACGTGGATGA ACCAGTTCGT CCAGGCGCTG AACGCCCGGC TGCGGCTGCA GCGGCTCGAC CTCGTGTTCG GGCGCGGCAA CGAGTTCCTG TTCGGCGCCG ACCGGCTGAT CCTGCTGGTG CTGGGCGCCC GCGCCGTCAT CGACCAGTCG ATGACGCTCG GCATGCTGGT GGCGTTTCTG GCCTATCGCG ACCAGTTCTC GACCCGCATC GGCAACCTGA TCCAGTCGGG CTTCCAACTG CGGATGCTCA ACGTGCAGAC CGACCGGCTC TCGGACATCG TCATGACCGA GCCCGAGGAG GCCGCAGCCC CCCTCCCCGC CGCGGTGGAG CCGGTCGCGG GCCCCGCCCT CCTCCCCTCC GGCGAGCGCC CGCCGGTGCG CGGGGCGGCC CTGCGCGCCG TCGGCCTGTC CCTGCGCTAC GGCGACGACG AGCCCTGGGT GTTCCGCAAC CTCGGCCTGG AGGTGCCGCC GGGCCTCAGT CTCGCCATCA CTGGCCCCTC GGGCTGCGGC AAGAGTTCGG TGATGAAGAT CCTGATGGGC CTGCTGCCGC CCTCCGAGGG CGCGGTGCTG GTCGATGGGC GCGACATCCG CGCCGGGGGG CTCGCCGCCT ACCGCGCCCG CATCGCCGGA GTCATGCAGG ATGACGGGTT GTTCGCCGGC TCGATCGCCG AGAACATCGC CTGTTTCGAC GAGCGGCCCG ATCCCGGCTG GATCCGCGAA TGCGCCGCCC GCGCCGCGAT CCTCGACGAC ATCGCCCGCA CGCCGATGGG CTTCGAGACG CTCGTCGGCG ACATGGGCTC GACCCTGTCC GGCGGTCAGC GCCAGCGGGT GATCCTGGCC CGCGCCCTCT ACCGGCGCCC GGAGATCCTG TTCCTCGACG AGGCGACGAG CGCGCTCGAC GAGCCGACCG AGGCGGTGAT CGCCGCCGCG CTCCGCGACC TGAAGATGAC GCGGGTCATC GTCGCCCACC GCCCGGCGAC CGTGGCCCAT GCCGACCTGC GCTACGATTT TTCGACCGAC GCGCCGCGGG TGTCAGCGCA GGCGACGGAG ACCGCCGATT GA
|
Protein sequence | MSLLSDLQFG FRRRLPVVLQ AEAAECGMAC LAMVLGYHGR RVDLGSLRAR HALSLKGMTL RNLMDLSGTM GLSTRALRVE LTDLGRLRLP CILHWGLNHF VVLARVGRRE IVIHDPARGR RRLSLAEASR DFTGVALEVS PNQSFVRERA ARGLALSDLF RGMAGIRSAM IQILALSLGI ELIAILMPIA SQIVIDEVIV NGDLDLLLVV ALGLALLLVL QLGLGVARSW AIMLTGTGLN YQWSGSLFDH LSRLPLDYFQ KRHVGDVISR FGTLATIQKG ITTDLVQALL DGLMSVGMLI MLFLYGGWLA LVALAATALN AGLRIAAYKA YREGTEEAIV AEARQQSHFI ETVRGMASVK LLNLRERRRG TWMNQFVQAL NARLRLQRLD LVFGRGNEFL FGADRLILLV LGARAVIDQS MTLGMLVAFL AYRDQFSTRI GNLIQSGFQL RMLNVQTDRL SDIVMTEPEE AAAPLPAAVE PVAGPALLPS GERPPVRGAA LRAVGLSLRY GDDEPWVFRN LGLEVPPGLS LAITGPSGCG KSSVMKILMG LLPPSEGAVL VDGRDIRAGG LAAYRARIAG VMQDDGLFAG SIAENIACFD ERPDPGWIRE CAARAAILDD IARTPMGFET LVGDMGSTLS GGQRQRVILA RALYRRPEIL FLDEATSALD EPTEAVIAAA LRDLKMTRVI VAHRPATVAH ADLRYDFSTD APRVSAQATE TAD
|
| |