Gene Mpop_4552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4552 
Symbol 
ID6313037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4857390 
End bp4859561 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content71% 
IMG OID642653232 
ProductABC transporter related 
Protein accessionYP_001927185 
Protein GI188583740 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTGC TGTCGGATCT TCAGTTCGGT TTCCGGCGGC GCCTGCCGGT CGTGCTCCAG 
GCCGAGGCCG CCGAGTGCGG CATGGCCTGC CTCGCCATGG TGCTGGGCTA TCACGGGCGC
CGGGTCGATC TCGGAAGCTT GCGCGCCCGC CACGCCCTCT CGCTCAAGGG CATGACGCTG
CGAAACCTCA TGGACCTGTC GGGCACGATG GGGCTCTCGA CGCGGGCGCT CCGGGTGGAG
CTGACCGATC TCGGTCGTCT GCGCCTGCCC TGCATCCTGC ACTGGGGGCT CAACCACTTC
GTCGTGCTGG CGCGGGTCGG GCGCCGGGAG ATCGTGATCC ACGATCCCGC CCGCGGGCGC
CGACGTTTGA GCCTCGCGGA AGCCTCGCGG GACTTCACCG GCGTGGCGCT GGAGGTGAGC
CCGAACCAGA GCTTCGTGCG CGAGCGGGCG GCGCGGGGGC TGGCCCTGTC CGACCTGTTC
CGCGGCATGG CCGGCATCCG CTCGGCGATG ATCCAGATCC TGGCCCTGTC GCTCGGGATC
GAACTCATCG CGATCCTGAT GCCGATCGCC TCGCAGATCG TCATCGACGA GGTGATCGTG
AACGGCGATC TCGACCTGCT GCTCGTCGTC GCCCTCGGGC TCGCCCTGCT GCTGGTGCTG
CAACTGGGGC TCGGCGTCGC CCGGAGCTGG GCGATCATGC TCACCGGCAC GGGGCTGAAC
TACCAGTGGT CGGGCTCGCT GTTCGACCAC CTCTCCCGGC TGCCGCTGGA CTATTTCCAG
AAGCGGCATG TCGGCGACGT GATCTCGCGC TTCGGCACGC TGGCCACGAT CCAGAAGGGC
ATCACCACCG ACCTCGTCCA GGCGCTGCTC GACGGGCTGA TGTCGGTCGG CATGCTGATC
ATGCTGTTCC TCTACGGCGG CTGGCTCGCC CTGGTGGCGC TCGCCGCCAC CGCCCTCAAC
GCCGGCCTGC GCATCGCCGC TTACAAGGCG TACCGCGAGG GCACCGAGGA GGCGATCGTG
GCGGAAGCGC GCCAGCAGAG CCACTTCATC GAGACCGTGC GCGGCATGGC GAGCGTCAAG
CTCTTGAACC TGCGCGAGCG CCGCCGCGGC ACGTGGATGA ACCAGTTCGT CCAGGCGCTG
AACGCCCGGC TGCGGCTGCA GCGGCTCGAC CTCGTGTTCG GGCGCGGCAA CGAGTTCCTG
TTCGGCGCCG ACCGGCTGAT CCTGCTGGTG CTGGGCGCCC GCGCCGTCAT CGACCAGTCG
ATGACGCTCG GCATGCTGGT GGCGTTTCTG GCCTATCGCG ACCAGTTCTC GACCCGCATC
GGCAACCTGA TCCAGTCGGG CTTCCAACTG CGGATGCTCA ACGTGCAGAC CGACCGGCTC
TCGGACATCG TCATGACCGA GCCCGAGGAG GCCGCAGCCC CCCTCCCCGC CGCGGTGGAG
CCGGTCGCGG GCCCCGCCCT CCTCCCCTCC GGCGAGCGCC CGCCGGTGCG CGGGGCGGCC
CTGCGCGCCG TCGGCCTGTC CCTGCGCTAC GGCGACGACG AGCCCTGGGT GTTCCGCAAC
CTCGGCCTGG AGGTGCCGCC GGGCCTCAGT CTCGCCATCA CTGGCCCCTC GGGCTGCGGC
AAGAGTTCGG TGATGAAGAT CCTGATGGGC CTGCTGCCGC CCTCCGAGGG CGCGGTGCTG
GTCGATGGGC GCGACATCCG CGCCGGGGGG CTCGCCGCCT ACCGCGCCCG CATCGCCGGA
GTCATGCAGG ATGACGGGTT GTTCGCCGGC TCGATCGCCG AGAACATCGC CTGTTTCGAC
GAGCGGCCCG ATCCCGGCTG GATCCGCGAA TGCGCCGCCC GCGCCGCGAT CCTCGACGAC
ATCGCCCGCA CGCCGATGGG CTTCGAGACG CTCGTCGGCG ACATGGGCTC GACCCTGTCC
GGCGGTCAGC GCCAGCGGGT GATCCTGGCC CGCGCCCTCT ACCGGCGCCC GGAGATCCTG
TTCCTCGACG AGGCGACGAG CGCGCTCGAC GAGCCGACCG AGGCGGTGAT CGCCGCCGCG
CTCCGCGACC TGAAGATGAC GCGGGTCATC GTCGCCCACC GCCCGGCGAC CGTGGCCCAT
GCCGACCTGC GCTACGATTT TTCGACCGAC GCGCCGCGGG TGTCAGCGCA GGCGACGGAG
ACCGCCGATT GA
 
Protein sequence
MSLLSDLQFG FRRRLPVVLQ AEAAECGMAC LAMVLGYHGR RVDLGSLRAR HALSLKGMTL 
RNLMDLSGTM GLSTRALRVE LTDLGRLRLP CILHWGLNHF VVLARVGRRE IVIHDPARGR
RRLSLAEASR DFTGVALEVS PNQSFVRERA ARGLALSDLF RGMAGIRSAM IQILALSLGI
ELIAILMPIA SQIVIDEVIV NGDLDLLLVV ALGLALLLVL QLGLGVARSW AIMLTGTGLN
YQWSGSLFDH LSRLPLDYFQ KRHVGDVISR FGTLATIQKG ITTDLVQALL DGLMSVGMLI
MLFLYGGWLA LVALAATALN AGLRIAAYKA YREGTEEAIV AEARQQSHFI ETVRGMASVK
LLNLRERRRG TWMNQFVQAL NARLRLQRLD LVFGRGNEFL FGADRLILLV LGARAVIDQS
MTLGMLVAFL AYRDQFSTRI GNLIQSGFQL RMLNVQTDRL SDIVMTEPEE AAAPLPAAVE
PVAGPALLPS GERPPVRGAA LRAVGLSLRY GDDEPWVFRN LGLEVPPGLS LAITGPSGCG
KSSVMKILMG LLPPSEGAVL VDGRDIRAGG LAAYRARIAG VMQDDGLFAG SIAENIACFD
ERPDPGWIRE CAARAAILDD IARTPMGFET LVGDMGSTLS GGQRQRVILA RALYRRPEIL
FLDEATSALD EPTEAVIAAA LRDLKMTRVI VAHRPATVAH ADLRYDFSTD APRVSAQATE
TAD