| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4499 |
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| Symbol | rpoB |
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| ID | 6309557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4794057 |
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| End bp | 4798184 |
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| Gene Length | 4128 bp |
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| Protein Length | 1375 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642653180 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001927133 |
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| Protein GI | 188583688 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATA CGCTGGTCGG TCGCAAGCGC ATTCGCAAGT TCTTCGGGAA GATCCGGGAA
GTCGCCGAGA TGCCGAACCT CATCGAGGTT CAGAAGGCGT CCTACGACCA GTTCCTGATG
GTGGACGAGC CGGAAGGCGG ACGCGCCGAC GAAGGCCTGC AGAGCGTCTT CAAGTCGGTG
TTCCCGATCT CCGACTTCGC CTCGACGGCG CTGTTGGAGT TCGTGCGCTA CACCTTCGAG
CAGCCGAAAT ACGACGTCGA CGAGTGCCGC CAGCGCGGCA TCACCTTCGC GGCCCCGCTC
AAGGTGACGC TGCGCCTGAT CGTGTTCGAT GTGGACCCGG ATACCGGCGC CAAGTCCGTC
AAGGACATCA AGGAGCAGGA CGTCTACATG GGCGACATGC CGCTCATGAC GGATAACGGC
ACCTTCATCG TCAACGGCAC CGAGCGCGTC ATCGTCTCGC AGATGCACCG CTCGCCGGGC
GTGTTCTTCG ACCACGACAA GGGCAAGACG CACTCCTCGG GCAAGCTGCT GTTTGCCGCC
CGCATCATCC CCTACCGGGG CTCCTGGCTC GACGTCGAGT TCGATGCCAA GGACATCGTG
CACGTGCGCA TCGACCGCAA GCGCAAGCTG CCGGTCACCT CGCTGCTGTT CGCCCTCGGC
CTCGACGGCG AAGAAATCCT CTCGACCTTC TACAACCGCG TCTCCTACGA GCGGGACGGG
GCGGACTGGC GCGTGCCGTT CGACGCCGAG CGTCTGAAGG GCTTCAAGGC CTCCGTCGAC
CTCATCGACG CCGATTCCGG CGAGGTGGTG CTCGAAGCCG GCAAGAAGCT GAACGCCCGC
AACGCGCGGC TCATCGGCGA GAAGGGCACC AAGTTCCTCA AGGCGACCGA CGAGGATCTC
GTCGGCCAGT ACATCGCCGA GGATCTCGTC AACGCCAAGA CCGGCGAGAT CTGGGCCGAG
GCCGGCGACG AGATCTCCGA GAAGCTCCTG AAGGCGCTCG ACGATGTCGG CGTCACCGAG
ATCCCGGTGC TCGACATCGA CCACGTCAAT GTCGGTCCCT ACATTCGCAA CACGCTGGCC
GTGGACAAGA ACTCGGCCCG CGAGGGCGCG CTGTTCGACA TCTACCGCGT CATGCGCCCC
GGCGAGCCGC CGACGCTCGA CACCGCGGAG GCGATGTTCC ACTCGCTGTT CTTCGATGCC
GAGCGCTACG ACCTCTCCGC GGTCGGCCGC GTGAAGATGA ACATGCGCCT CGACCTCGAC
GCCGCCGACA CCGTGCGCAC GCTGCGCCGC GAGGACATGC TCGCGGTCGT CAAGGCGCTC
GTCGACCTGC GCGACGGCAA GGGCGAGATC GACGATATCG ACCACCTCGG CAACCGCCGC
GTCCGCTCGG TCGGCGAGCT GATGGAGAAC CAGTATCGCC TGGGTCTCCT GCGGATGGAG
CGCGCCATCA AGGAGCGCAT GTCCTCGGTC GATATCGACA CGGTGATGCC GCAGGATCTC
ATCAATGCGA AGCCCGCGGC CGCCGCGGTG CGCGAGTTCT TCGGCTCGTC GCAGCTTTCG
CAGTTCATGG ACCAGACCAA CCCGCTGTCG GAAGTGACGC ACAAGCGCCG TCTCTCGGCG
CTCGGCCCGG GCGGTCTGAC CCGCGAGCGC GCCGGCTTCG AGGTGCGCGA CGTGCACCCG
ACGCACTATG GCCGCATCTG CCCGATCGAG ACGCCGGAAG GCCCGAATAT CGGCCTGATC
AACTCGCTGG CGACGTTCGC CCGCGTGAAC AAGTACGGCT TCATCGAGAC GCCGTTCCGC
CGGGTGAAGG ACGGCGTGGT GACCGACGAG GTCGCCTACC TCTCCGCCAT GGAGGAGGCC
AAGTACTACG TCGCCCAGGC CAATGCCGGC ATGGACGCCG CCCGCAAGCT GACGGACGAC
CTCGTGGTCT GCCGCCGCGC GGGTGAGGTC ATCGTGGTCG CCCCCGACCG CGTCGACCTC
ATGGACGTGA GCCCCAAGCA GCTCGTCTCG GTCGCCGCGG CCTTGATCCC GTTCCTCGAG
AACGACGACG CCAACCGCGC CCTGATGGGC TCGAACATGC AGCGCCAGGC GGTGCCGCTG
GTTCGCGCCG ACGCACCCTT CGTCGGCACC GGCATGGAAG CCGTGGTCGC CCGCGACTCC
GGCGCGGCCA TCGCCGCCCG CCGCTCCGGC ATCGTCGATC AGGTGGACGC CACCCGTATC
GTCATCCGCG CGACGGAGGA AACCGACCCG ACCAAGCCCG GCGTCGACAT CTACCGCCTC
CAGAAGTTCC AGCGCTCCAA CCAGTCGACC TGCATCACGC AGAAGCCGCT GGTGCGCGTC
GGCGAGCCGG TGAAGAAGGG CGAGATCATC GCCGACGGTC CCTCGACCGA GTTCGGCGAA
CTCGCGCTCG GCCGCAACGT GCTCGTCGCG TTCATGCCGT GGAACGGGTA CAACTTCGAG
GACTCGATCC TGCTCTCCGA GCGGATCGTG AAGGATGACG TGTTCACCTC GATCCACATC
GAGGAATTCG AGGTGATGGC CCGCGACACC AAGCTGGGTC CGGAGGAGAT CACCCGCGAC
ATCCCGAACG TCTCGGAAGA GGCGCTCAAG AACCTCGACG AGGCCGGCAT CGTCTATATC
GGCGCCGAGG TGCATGCCGG CGACATCCTC GTCGGCAAGA TCACGCCGAA GGGCGAGAGC
CCGATGACGC CGGAGGAGAA GCTGCTCCGC GCCATCTTCG GCGAGAAGGC GTCCGACGTG
CGCGACACCT CGCTCCGGGT CCCGCCCGGG GTCACCGGGA CCATTGTCGA AGTTCGCGTG
TTCAACCGCC ACGGCGTCGA CAAGGACGAG CGCGCGCAAG CCATCGAGCG CGAGGAGATC
GAGCGTCTCG CCAAGGACCG CGACGACGAG CAGACCATCC TCGACCGCAA CACCTATGCG
CGTCTCGCCG AGGTGCTGAT CGGCCAGTCG CCGATCGCCG GTCCGAAGGG CTTCCGCAAG
GACACCACGC TGACCCGCGA GGGCATCAGC GAGTATCCCC GCTCGCAATG GTGGCAGTTC
GCCGTCGTCG ACGACCGTCT GATGACGGAG ATCGAGGCGA TGCAAAAGCA GTACGACGAG
TCGAAGAAGC GCCTCGAGCA GCGCTTCCTC GACAAGGTCG AGAAGCTGCA GCGCGGCGAC
GAGCTTCCGC CCGGCGTCAT GAAGATGGTC AAGGTCTTCG TGGCGGTGAA GCGCAAGATC
CAGCCCGGCG ACAAGATGGC CGGCCGCCAC GGCAACAAGG GTGTCGTGTC GCGCATCGTG
CCGATCGAGG ACATGCCGTT CCTCGAAGAC GGCACGCATG CCGACATCGT GCTCAACCCG
CTCGGCGTGC CCTCGCGCAT GAATGTCGGC CAAATCCTCG AGACCCACCT CGGCTGGGCG
GCTGCGGGCT TGGGTCGCAA GGTCTCCAAG GCGGTCGATG CCTACCTGAA GAACCAGGAC
ATCGCGCCGC TGCGGGCCGA GATGGAAGCG ATCTACTCGC CGTCCGAGCT GGAGGGTCTC
TCCGACGAGG CTCTGGCGGA AGCCGGCAAC AACGTGCGCC GCGGCGTGCC GATGGCGACG
CCGGTGTTCA ACGGCGCCAA GGAAGCCGAC ATCGAGACGA TGCTGGAGAT GGCCGGGCTC
GACCGCTCGG CGCAGTCGAC GCTCTACGAC GGGCGGACCG GCGAGCCCTT CGACCGCAAG
GTCACCATGG GCTACATCTA CATGCTGAAG CTGCACCACC TCGTGGACGA CAAGATCCAC
GCGCGCTCGA TCGGCCCGTA CTCGCTCGTC ACCCAGCAGC CGCTGGGCGG CAAGGCGCAG
TTCGGCGGCC AGCGCTTCGG TGAGATGGAG GTCTGGGCGC TGGAGGCCTA CGGCGCGGCC
TACACGCTGC AGGAGATGCT GACGGTGAAG TCGGACGACG TGGCCGGCCG CACCAAGGTC
TACGAGGCGA TCGTCCGCGG CGACGACACC TTCGAGGCCG GCATCCCCGA ATCCTTCAAC
GTGCTCGTCA AGGAGATGCG CTCGCTCGGC CTCAACGTCG AGCTGACGAA CTCCAAGCAG
CAGGCGGCCA ACGACCAGAT CGAACCGCCG GCCGACGCGG CCGAGTAA
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| Protein sequence | MANTLVGRKR IRKFFGKIRE VAEMPNLIEV QKASYDQFLM VDEPEGGRAD EGLQSVFKSV
FPISDFASTA LLEFVRYTFE QPKYDVDECR QRGITFAAPL KVTLRLIVFD VDPDTGAKSV
KDIKEQDVYM GDMPLMTDNG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAA
RIIPYRGSWL DVEFDAKDIV HVRIDRKRKL PVTSLLFALG LDGEEILSTF YNRVSYERDG
ADWRVPFDAE RLKGFKASVD LIDADSGEVV LEAGKKLNAR NARLIGEKGT KFLKATDEDL
VGQYIAEDLV NAKTGEIWAE AGDEISEKLL KALDDVGVTE IPVLDIDHVN VGPYIRNTLA
VDKNSAREGA LFDIYRVMRP GEPPTLDTAE AMFHSLFFDA ERYDLSAVGR VKMNMRLDLD
AADTVRTLRR EDMLAVVKAL VDLRDGKGEI DDIDHLGNRR VRSVGELMEN QYRLGLLRME
RAIKERMSSV DIDTVMPQDL INAKPAAAAV REFFGSSQLS QFMDQTNPLS EVTHKRRLSA
LGPGGLTRER AGFEVRDVHP THYGRICPIE TPEGPNIGLI NSLATFARVN KYGFIETPFR
RVKDGVVTDE VAYLSAMEEA KYYVAQANAG MDAARKLTDD LVVCRRAGEV IVVAPDRVDL
MDVSPKQLVS VAAALIPFLE NDDANRALMG SNMQRQAVPL VRADAPFVGT GMEAVVARDS
GAAIAARRSG IVDQVDATRI VIRATEETDP TKPGVDIYRL QKFQRSNQST CITQKPLVRV
GEPVKKGEII ADGPSTEFGE LALGRNVLVA FMPWNGYNFE DSILLSERIV KDDVFTSIHI
EEFEVMARDT KLGPEEITRD IPNVSEEALK NLDEAGIVYI GAEVHAGDIL VGKITPKGES
PMTPEEKLLR AIFGEKASDV RDTSLRVPPG VTGTIVEVRV FNRHGVDKDE RAQAIEREEI
ERLAKDRDDE QTILDRNTYA RLAEVLIGQS PIAGPKGFRK DTTLTREGIS EYPRSQWWQF
AVVDDRLMTE IEAMQKQYDE SKKRLEQRFL DKVEKLQRGD ELPPGVMKMV KVFVAVKRKI
QPGDKMAGRH GNKGVVSRIV PIEDMPFLED GTHADIVLNP LGVPSRMNVG QILETHLGWA
AAGLGRKVSK AVDAYLKNQD IAPLRAEMEA IYSPSELEGL SDEALAEAGN NVRRGVPMAT
PVFNGAKEAD IETMLEMAGL DRSAQSTLYD GRTGEPFDRK VTMGYIYMLK LHHLVDDKIH
ARSIGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK SDDVAGRTKV
YEAIVRGDDT FEAGIPESFN VLVKEMRSLG LNVELTNSKQ QAANDQIEPP ADAAE
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