Gene Mpop_4476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4476 
Symbol 
ID6310050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4768376 
End bp4768951 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content74% 
IMG OID642653156 
Product2'-5' RNA ligase 
Protein accessionYP_001927110 
Protein GI188583665 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCC TGTTCACGGG GCTGGAGATC CCGGTGGAGA TCGCCGGGCG GCTGTCGTTC 
TTCCGCGGCG GCCTGCCCGG GGCGCGCTGG ATCGAGCCGT CGGACTACCA CATCACCCTG
CGCTTCCTCG GCGAGGTCGA CGACGTCGTC GCCGCCGATC TCGATGCGGG TCTGGCGGAG
GCGCGGGCGC GCCCGGCCTT CACCGTGACC CTCGACGGGC TCGCGAGCTT CGGCGGCGAC
CGGCCGCGGG CGATCTACGC CTCCGTCGTG CCGAGCCCCG AGCTGACCGA CCTGCAGGAG
GAGCACGAGC GCATCGCCCG CCGGGCCGGT GCCGCGCCGG AGCGGCGCAA GTTCACGCCG
CACGTGACGC TCGCCCGGCT CAACCGCGAG GCCGGACCGG AGGCGGTGGC GCGCACTCTC
ACCGAAGCTG GCGTGTTTCC CCGCCTGACC TTCACGGCGC GGCGCGCCGC CCTGTTCTCG
GCCCGCACCT CGCGGGGCGG CGGTCCCTAC CTCGTCGAGG CGGCCTATCC CTTCCTCGGC
GGGGATTTCG ACCCGGAGGA GGGGGAAGAC GGGTAG
 
Protein sequence
MPRLFTGLEI PVEIAGRLSF FRGGLPGARW IEPSDYHITL RFLGEVDDVV AADLDAGLAE 
ARARPAFTVT LDGLASFGGD RPRAIYASVV PSPELTDLQE EHERIARRAG AAPERRKFTP
HVTLARLNRE AGPEAVARTL TEAGVFPRLT FTARRAALFS ARTSRGGGPY LVEAAYPFLG
GDFDPEEGED G