Gene Mpop_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4321 
Symbol 
ID6309617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4605102 
End bp4606835 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content78% 
IMG OID642653006 
ProductRNA-binding S4 domain protein 
Protein accessionYP_001926962 
Protein GI188583517 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0568238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TTCCAGACCC CTCCCCGGCC GCGCCCGCGG ACCAGACCGC GGATCAGCCC 
GCCGCGCCCG AGGGCGAGCG CATTGCCAAG GCCATTGCCC GCGCCGGCAT CGCGTCCCGC
CGCGATGCGG AGGCGATGAT CGAGGCCGGC CGCGTCAGCC TCAACGGCAA GATCCTGACC
TCGCCCGCGA TCAACGTCAC CGAATCCGAC CGCATCGCGA TCGACGGCGA GCCTCTGCCC
GCCCGCGAGC GCACCCGGCT GTGGCTGCTG CACAAGCCGC GCGGCGTCGT CACCACCGCC
CGCGACCCGG AAGGGCGCCA GACGGTGTTC GACGGGTTGC CCGACGACCT GCCGCGGGTC
GTCGCCATCG GCCGGCTCGA CATCAACACC GAGGGGCTCT TGCTCCTCAC CAATGACGGC
GGGCTCGCCA AGGTGATCGC CCATCCCGAT ACCGGCTGGC TGCGCCGCTA CCGGGTGCGC
GCCTTCGGCG ACATCACCCA GGCCGATCTC GACCGGCTCA AGAAGGGCGT GACCGTCGAC
GGCATGGAGT ACGGCCCCGT CGAGGCGACC CTCGACCGGG TGCAGGGCGA CAACCTCTGG
CTCACCCTCG GCCTGCGCGA GGGCAAGAAC CGCGAGGTCA AGCGCATCCT CGAACATCTC
GGCCTCTCGG TGAACCGGCT GATCCGGCTC TCGTTCGGGC CGTTCCAGCT CGGCGATCTC
GAAGTCGGGC TGGTCGAGGA GATCCGCACC AAGGTGCTGA AGGAGCAGCT CGGCAAGAGC
CTCGCCGAGC AGGCCGGTGT CGATTTCGAG AGCCCGGTGC GCGAGGCCAT CGCCCCGTTC
GGCAGTCCGA AGAAGGCGGC CCGCGCCGCG CAGAGCCCGC GGGCCGAGGC GCCCGCCGGG
CGGGGCGGCC GTCAGGGCGC CCACGACGAG GGACGCTCGG AGCCCCGCTC GGGCGCCCGC
GGCGGGGCGG CGGGCCGTCC GCCGCGCGAT CCCGCCCGTC CGGCCGCGCC GCGCGCCGGT
GCGCGCCCGG CCCAGCGGGC GCCCTCGCCC ACCGTGTGGC GGGCCGACGA CGAGACCCGC
CCCCGGGCGA GCAAGGTGCC GCGCCGCGGC ACCGATCCGA AGACCGCCCG CGCGGCGGCG
GCCGAGCGCG GCCGCGAGCG GGTCGGCGCG ATCCAGGCGG CCGGCGAGCG CCGGGTGCTG
GTCGAGCGGC TCCAGCCCAC GCCGGAGACG CCCGCCCCCG AGCCGCACCG CCGGGTCCGC
TTCCGCACCG AAGAGGAGCG CTCCGCGCGT CAAGAGAGAC CCGAACGTCA GGAAAGACCG
GAGCGTTCGC GCGAGGACCG GCCGCGCCGG GATGCGCCTG CGGGCGATGC CCGTCCCCGC
CGCCGCGAGG CCGGAGAGGG CGCCGCCCCC GAGCGGCGCG GGCCGCCGCG CGAGCGCCGC
TTCGAGGGTG AGGGCCGTCC CGAGGGCCGC CCGCCCCGCG AGCGCAGCGA AGGCCGGCCC
CAGCGCGACC GCGGCGAGGG TGCCCCCCGC CGCGAGCGTT CCGCCGAGGC GGGGGCGCCC
GAGCGCCGCG GCCCCCCGCG CGACCGGCCC CGCGCCGCCG AGGGCGAGCG CCCGGCGCGT
TCCCCGCGCG GGGCCGACGC GCCCGAGCGC GGCGGTTTCC GCAAGGGGCC GGGGGGGCGG
CTCCGGCGGC AAGCCCGGCA TCAAGGGCGG CGCCCGCGAC GGCGCCAGGG GTGA
 
Protein sequence
MTDIPDPSPA APADQTADQP AAPEGERIAK AIARAGIASR RDAEAMIEAG RVSLNGKILT 
SPAINVTESD RIAIDGEPLP ARERTRLWLL HKPRGVVTTA RDPEGRQTVF DGLPDDLPRV
VAIGRLDINT EGLLLLTNDG GLAKVIAHPD TGWLRRYRVR AFGDITQADL DRLKKGVTVD
GMEYGPVEAT LDRVQGDNLW LTLGLREGKN REVKRILEHL GLSVNRLIRL SFGPFQLGDL
EVGLVEEIRT KVLKEQLGKS LAEQAGVDFE SPVREAIAPF GSPKKAARAA QSPRAEAPAG
RGGRQGAHDE GRSEPRSGAR GGAAGRPPRD PARPAAPRAG ARPAQRAPSP TVWRADDETR
PRASKVPRRG TDPKTARAAA AERGRERVGA IQAAGERRVL VERLQPTPET PAPEPHRRVR
FRTEEERSAR QERPERQERP ERSREDRPRR DAPAGDARPR RREAGEGAAP ERRGPPRERR
FEGEGRPEGR PPRERSEGRP QRDRGEGAPR RERSAEAGAP ERRGPPRDRP RAAEGERPAR
SPRGADAPER GGFRKGPGGR LRRQARHQGR RPRRRQG