| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4178 |
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| Symbol | |
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| ID | 6311629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4461787 |
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| End bp | 4464981 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642652867 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001926825 |
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| Protein GI | 188583380 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCAAGTTCTT CATCGATCGC CCGATCTTCG CGGGCGTGCT CTCGGTGCTC
ATCTTCATCG GCGGCCTCAT CTCGCTCTTT GCGATGCCGA TCTCCGAGTA TCCGGACGTG
GTGCCGCCCT CGGTGGTGGT GCGGGCGACC TTCCCGGGCG CCAACCCCAA GGTCATCGTC
GAGACGGTGG CGACGCCGAT CGAGGAGCAG ATCAACGGTG TCGAGGGCAT GCTCTACATG
TCGAGCCAAG CCACGACGGA CGGGATCATG ACGCTGACCG TCACCTTCCG CCTGGGCACC
GATCCGGACA AGGCGCAGCA GCTCGTTCAG AACCGTGTCT CGCAGGCCGA GCCGCGCCTG
CCGGCCATCG TGCGTCAGCT CGGCATCGTC ACGGTGAAGT CCTCGCCCGA CCTGACCATG
GTCGTGCACC TCGTCTCGCC CAATGGGCGC TACGACATGA CCTATCTGCG CAACTATGCC
GTGCTGAACA TCAAGGATCG CCTCGCCCGT CTCGACGGCG TGGGACAGGT GCAGCTGTTC
GGCTCGGGCG ACTACGCGAT GCGGATCTGG CTCGATCCGC AGAAGGTGGC CGAGCACGGC
CTGTCGGCGG GCGACGTGGT GCGCGAGATC CAGGCGCAGA ACGTGGAGGC GGCGGCGGGC
GTCATCGGCG CTTCGCCGGC CGTTCCCGGC CTCGACCTGC AACTCTCGCT CAACGCGGAA
GGGCGCCTCA CCAGTGAGGA GCAATTCGGC GACATCGTCG TGAAGACCGG AGAGAACGGC
GAGATCACGC GGCTTCGCGA CATCGCCCGG ATCGAACTCG GCGCCTCGGA TTATGCGCTC
CGCTCACTCC TCGACAACAA GTCGGCGGTG GCGATCCCGA TCTCTCAGTC GCCGGGATCG
AATGCGATCC AGATCTCGGA CGAGGTCCGC CGGACCATGG CCGAGATCAA GAAGAATATG
CCGGAGGGTG TCGACTATCA GATCGTCTAC GATCCGACGC AGTTCGTGCG CGCCTCGATC
GAGGCCGTCA TCCACACGCT GCTGGAGGCG ATCGCCCTCG TCGTCCTCGT GGTGATCCTG
TTCCTGCAGA CGTGGCGAGC CTCGATCATC CCGCTGCTCG CCGTGCCGGT CTCCATCGTC
GGTACCTTTG CGGTGATGCA TGCCTTCGGC TTCTCGATCA ACGCGCTGAG CCTGTTCGGC
CTCGTCCTCG CCATCGGCAT CGTCGTCGAC GACGCCATCG TGGTGGTGGA GAATGTCGAG
CGCAACATCG AGGCCGGGCT GTCGCCGCGG GACGCCAGCT ACCAGGCGAT GCGCGAGGTC
TCGGGGCCGA TCATCGCCAT CGCGCTGGTG CTCGTCGCGG TGTTCGTGCC GCTCGCCTTC
ATCAGTGGCC TGACCGGCCA GTTCTACAAG CAATTCGCCC TGACCATCGC GATCTCGACC
GTCATCTCGG CGATCAACTC GCTGACCCTG TCCCCTGCCC TCTCGGCGCT GCTCCTGAAA
GACCATCACG CACCCAAGGA CCGGCTGACC CGGGTGCTCG ACACCCTCCT CGGCTGGTTC
TTCCGCCGCT TCAACCGCGC CTTCGGGCGC GCCTCGGACG GGTATGGGCG CGGTGTCGGC
GGCGTCGTCT CGCGAAAGGG CGCGATGATG GTCCTCTACC TCGTGCTCGT CGGCTTGACC
GTTGCGCTGT TCCGCCAGAT CCCGGGCGGC TTCGTACCGG GGCAGGACAA GCAGTACCTC
GTCGGCTTCG CGCAGCTGCC CGACGGCGCG ACCCTCGACC GGACCGAGGA GGTGATCCGG
GCGATGAGCG AGATCGCCCT GAAGGAGCCC GGCGTCGAGA GTGCCGTCGC CTTCCCGGGG
CTTTCGATCA ACGGCTTCAC CAACAGCTCG AACTCGGGGA TCGTGTTCTC GACGCTCAAG
CCCTTCGCGG AGCGCAAGGA TCCCGCGCTG AGCGGGGCCG CCATCGCGCA ATCCTTGAAC
AGGAAGTTCG CCGCGATCCC GGAAGCGTTC ATCGCGATGT TCCCGCCCCC GCCGGTCAAT
GGCCTGGGCA CAATCGGCGG CTTCAAGCTG CAGATCGAGG ATCGCGCCGG CCTCGGCTAC
GAGGCGCTGA ACGAGGCGAC CAAGGCATTC ATGGCCAAGG CCGCGCAGGC GCCGGAGCTT
GCCGGCCTGT TCTCCAGCTT CCAGATGAAC GTACCGCAGC TCTTCGCCGA CATCGATCGG
ACCAAGGCGC GCCAGCTGCG CATCCCGGTC ACCGACGTGT TCGACACGCT GCAGATCTAT
CTGGGGTCTC TCTACGTCAA CGACTTCAAC CGGTTCGGCC GCACTTACTC GGTTCGCGTC
CAGGCCGACG CGCCGTTCCG CGCGCGCCAG GACGATGTCG GGCTGCTCAA GGTCCGCGCC
GGATCGGGCG AGATGGTGCC GCTCTCGACC CTGCTGCGCG TCCGCCAGAC CGCGGGGCCG
GAGCGGGCCA TGCGCTACAA CGGCTTCCTT TCGGCCGACA TCAACGCGGG CGCCGCCCCC
GGCTTCTCGT CGGGCCAAGC GCAAGCGGCG GCAGCGCGCA TCGCCGCCGA GACGCTGCCG
CGCGGTTTCG CCTTCGAATG GACCGATCTG ACGTATCAGG AATTCATCGC CGGCAATTCC
GGGATCTGGG TCTTCCCGCT GGCGCTGCTG CTCGTCTTCC TCGTGCTCGC CGCGCAGTAC
GAGAGCCTCG CCCTGCCGCT CGCCATCCTG CTGATCGTGC CGATGGGCTT ACTGGCGGCC
ATGTTCGGGG TCTGGCTCTC GGCGGGCGAC AACAACGTCT TCACGCAGAT CGGCCTGATC
GTTCTGGTCG GTCTCTCGGC CAAGAACGCG ATCCTGATCG TGGAGTTCGC CCGCGAGCTG
GAGTTCGCCG GCCGCTCACC GGTTCAGGCC GCGATCGAGG CGAGCCGCCT GCGCCTGCGT
CCGATCCTGA TGACCTCGAT GGCCTTCATC ATGGGCGTCC TGCCGCTCGT GACGGCGACC
GGGGCCGGAG CGGAGATGCG CAGCGCCATG GGCGTCGCCG TGTTCTCCGG CATGATCGGC
GTGACCGCCT TCGGCCTGTT CCTGACACCG GTCTTCTATG TCCTGCTGCG CAGCCTCTCC
GGCAACAGGC GGCTCAAGCA GCACGGTGCA AGCCTGCCGA TGACCGACCA AGACGGCATC
GGGCAAGCTG CGTAG
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| Protein sequence | MNLSKFFIDR PIFAGVLSVL IFIGGLISLF AMPISEYPDV VPPSVVVRAT FPGANPKVIV
ETVATPIEEQ INGVEGMLYM SSQATTDGIM TLTVTFRLGT DPDKAQQLVQ NRVSQAEPRL
PAIVRQLGIV TVKSSPDLTM VVHLVSPNGR YDMTYLRNYA VLNIKDRLAR LDGVGQVQLF
GSGDYAMRIW LDPQKVAEHG LSAGDVVREI QAQNVEAAAG VIGASPAVPG LDLQLSLNAE
GRLTSEEQFG DIVVKTGENG EITRLRDIAR IELGASDYAL RSLLDNKSAV AIPISQSPGS
NAIQISDEVR RTMAEIKKNM PEGVDYQIVY DPTQFVRASI EAVIHTLLEA IALVVLVVIL
FLQTWRASII PLLAVPVSIV GTFAVMHAFG FSINALSLFG LVLAIGIVVD DAIVVVENVE
RNIEAGLSPR DASYQAMREV SGPIIAIALV LVAVFVPLAF ISGLTGQFYK QFALTIAIST
VISAINSLTL SPALSALLLK DHHAPKDRLT RVLDTLLGWF FRRFNRAFGR ASDGYGRGVG
GVVSRKGAMM VLYLVLVGLT VALFRQIPGG FVPGQDKQYL VGFAQLPDGA TLDRTEEVIR
AMSEIALKEP GVESAVAFPG LSINGFTNSS NSGIVFSTLK PFAERKDPAL SGAAIAQSLN
RKFAAIPEAF IAMFPPPPVN GLGTIGGFKL QIEDRAGLGY EALNEATKAF MAKAAQAPEL
AGLFSSFQMN VPQLFADIDR TKARQLRIPV TDVFDTLQIY LGSLYVNDFN RFGRTYSVRV
QADAPFRARQ DDVGLLKVRA GSGEMVPLST LLRVRQTAGP ERAMRYNGFL SADINAGAAP
GFSSGQAQAA AARIAAETLP RGFAFEWTDL TYQEFIAGNS GIWVFPLALL LVFLVLAAQY
ESLALPLAIL LIVPMGLLAA MFGVWLSAGD NNVFTQIGLI VLVGLSAKNA ILIVEFAREL
EFAGRSPVQA AIEASRLRLR PILMTSMAFI MGVLPLVTAT GAGAEMRSAM GVAVFSGMIG
VTAFGLFLTP VFYVLLRSLS GNRRLKQHGA SLPMTDQDGI GQAA
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