| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4126 |
|---|
| Symbol | |
|---|
| ID | 6311702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4409961 |
|---|
| End bp | 4413110 |
|---|
| Gene Length | 3150 bp |
|---|
| Protein Length | 1049 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652818 |
|---|
| Product | heavy metal efflux pump, CzcA family |
|---|
| Protein accession | YP_001926776 |
|---|
| Protein GI | 188583331 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCT TCCTCGTCAG CCAGTCGGTC CGCAACCGCC TGCTCGTCCT CGCGCTCGCC
GCGGTGCTGG TACTGTACGG CGCCTTCACC GCGACCAAGC TGCCGGTCGA CGTCTTTCCC
GACCTCAACA GACCCACCGT CACGGTCATG ACGGAGGCGG AAGGGTACGC CCCCCAGGAG
GTCGAGCAAC TCGTCACTTA TCCCATCGAG ACCCGGATGA ACGGTCTCCC CGGCGTGACC
CGCGTGCGCT CGGTCTCGGG CGTGGGCCTG TCCATCACCT ACGTCGAGTT CGACTGGGGG
ACCGACATCT ATCGGAACCG GCAGCAGGTC GCGGAGCGCC TGTCCCTCGT CCAGGACCAG
CTGCCCCGCG GCGTCACCCC TGTGATGGGC CCTGTCTCCT CGATCATGGG CCAGATCCTG
CTGGTGGCGG TCACCAGCGA GACCGCGACC CCCATGCAGG TGCGCGAGGT CGCCGACTTC
ACCATCCGGC CGCGCCTGCT GACCATTCCG GGCGTGGCGC AGGTCATCCC CATCGGCGGC
GAGGTGCGCC AGTTCCGGGT CAGCCCCAAC CCAGCGGCGA TGCGCGCGCT CGGGGTGACC
AATGCCCAGC TGGAGACGGC GCTGGCGCAG TTCGGCACCA ACGCCGGCGG CGGCTTCACC
GATCAGAACG CCCGCGAGTA CCTGATCCGG AGCATCGGCC GGACCATGAG CCTCGACGAC
CTGCGCAACC TCGTGGTCGC GACGGTCGCC GACACGCCTG TATACCTGCG CCAGGTCGGG
GAGGTGTCCT TTGCCGCGAA GGTGAAGCGG GGCGACGCCG GCTACATGGC CAAGCCAGCG
GTCATCGTCT CGGTCGAGAA ACAACCCGAC GTCGACACCG TGCGGCTGAC CCGCAGCATC
GAGACCGCAC TGAAGGAACT CAACCCGAAC CTGCCCGGCG GCATCAAGGC CGACCAAGTG
CTGTTCCGGC AGGCAGACTT CATCGAGACC TCGATCCGCA ACGTCGAGCG CGTCCTCGTC
GAGGCCGTGC TGGTCGTGGC GGTGGTGCTG TTCGCCTTCC TGCTGAACGT GCGCACCACG
GCGATCTCGC TGCTCGCCAT CCCGGTCTCG GTGCTGACGA CCGCGGTGGT GTTCCACCTG
TTCGGGCTGT CCATCAACAC GATGACGCTC GGGGGCCTGG CCATCGCCAT CGGCGAGCTC
GTCGACGACG CGGTGGTCGA TGTCGAGAAC ATCTACCGGC GGCTCGGCGA GAACCGAAAG
GCCGGCAACC CGAAGAGCGT GTTCCAGGTG GTGGTGGAGG CCTCGAACGA GGTGCGCTCC
GGCATCGTCT ACGCGACGCT GATCATCATC CTGGTGTTCG TGCCGCTCTT CGCCCTCTCG
GGCATCGAGG GCCGGCTCTT CGCACCCCTG GGGCAGGCCT ACATCATCTC CATCCTGGCG
AGCCTGCTCA CCTCCATCAC CCTGACGCCG GTGCTGGCGT CGCTGCTGCT CCCGGGGCTC
AGGAACCTTG AGGAGCACGA CAGCCGCTTC CTCAAGCTGC TCAAGCGGGG CAACGCCGCC
CTGCTGCGGG TCGCCTTCCG GCACAAGGGC TGGCTCGTCG GAAGCGTCGC CGTGGCGGTC
GCCGCCGCGG GCGTCGCCGC CTGGAACCTG CCCCGGGCCT TCCTGCCTCC GTTCAACGAG
GGCTCGTTCA CGGTCAGCAT GACCTTCAAC CCGGGCATCT CGCTCGCCGA GAGCAACCGG
GTCGGGCTGA TCGCCGAGAA GCTGCTCCTG GACATCCCGG GCGTGAAGGC GGTGGGCCGC
CGGACCGGTC GGGCCGAACT CGACGAGCAC GCCGAGGGCG TCCACTCCTC CGAGATCGAC
GTGGCGCTCG ACGAAGGTAC GAAGCGTCCG AAGGAGGCGC TGGTCGCCGA CATCCGCGGG
CGCCTCGCCG CCCTTCCGGT GGCGGTCAAC GTCGGCCAGC CGATCTCGCA CAGGCTCGAC
CACATGCTCT CGGGCGTGCG GGCCGAGATC GCGCTCAAGG TGTTCGGCGA CGACCTCGAC
GCCCTGCGGC GGGTCGCGAA CTCCCTGCGC GACCGCATGG CCTCGATCCC GGGTCTCGCG
GACCTGCAAG TCGAGCGGCA GGTGCGCATC CCGCAGCTTG AGGTGCGCGT CGACTACACC
CGGGCGGCCC TTTACGGCGT CCAGCCCGCG GCCGTCGTCG AGCAGATCAG CCGCCTCTCC
AACGGTCGGG TGGTCTCGAC GGTCGTCGAC GGCGTGCGCC GCTTCGACGT GGTATTGCGC
CTCGCCGAGA ACCGCCGGAC GACGACGGGG CTGGGCGACC TCCTCCTGGA GACGCCCTCG
GGCTGGGTGC CGGCGCGCCA GGTCGCCGAC ATCCGCGAGA CCGACGGGCC GAACCAGATC
CTGCGCGAGA ACGCCCGGCG CCGCATCGTG GTGCAGGCCA ACACCACGGC CGGCACCGAC
ATGGCGACCG TCGTGGCCGC CATCCGCGAG GCGGTGGCGA AGGAGCCGAT GCCGCCCGGC
TTCTTCACCA GCCTGGAAGG CACTTTCCAG GCGCAGGAGG AGGCGAGCCG GACCATCGCG
GCGCTCTCGG CGCTCTCTCT GGCCCTGGTC TTCGCCATCC TGTTCAGCCG CTACCGCTCG
GCCGCCCTGG CGCTCATCAT CATGGGCAAC GTGCCGCTCG CCCTGATCGG CTCGGTGGCC
GCGCTCTGGC TGGTGGGGCA GCCGCTCTCG GTGGCGTCGA TGATCGGCTT CATCACGCTG
ACCGGCATCG CCGCCCGCAA CGGCATCCTG AAGATCAGCC ACTACCTGAA CCTGTCACTG
CACGAGGGTA TGCCGTTCGG GCCCGACCTC GTGGTGCGCG GCAGCCTGGA GCGGCTGACC
CCGGTGCTGA TGACGGCGCT CTCGGCGGGC GTGGCGCTGG TGCCGCTGCT CTACGACGCC
GCGAGCCCGG GCAAGGAGAT CCTGCACCCG GTGGCGGTGA CGATCTTCGG CGGCCTCGTC
AGCGCGACGC TGCTCGACAC CTTCCTGACC CCCGTCCTGT TCCTGCGCTT CGGCCGCAAG
CCGCTGGAGC GGCTGCACGC CCTGCACGCC GAGGCGCCGG CCGACCCGTC CCCGGACGGC
GCGCGACCGC GCCCGGCCGA GGCCTACTGA
|
|---|
| Protein sequence | MFTFLVSQSV RNRLLVLALA AVLVLYGAFT ATKLPVDVFP DLNRPTVTVM TEAEGYAPQE
VEQLVTYPIE TRMNGLPGVT RVRSVSGVGL SITYVEFDWG TDIYRNRQQV AERLSLVQDQ
LPRGVTPVMG PVSSIMGQIL LVAVTSETAT PMQVREVADF TIRPRLLTIP GVAQVIPIGG
EVRQFRVSPN PAAMRALGVT NAQLETALAQ FGTNAGGGFT DQNAREYLIR SIGRTMSLDD
LRNLVVATVA DTPVYLRQVG EVSFAAKVKR GDAGYMAKPA VIVSVEKQPD VDTVRLTRSI
ETALKELNPN LPGGIKADQV LFRQADFIET SIRNVERVLV EAVLVVAVVL FAFLLNVRTT
AISLLAIPVS VLTTAVVFHL FGLSINTMTL GGLAIAIGEL VDDAVVDVEN IYRRLGENRK
AGNPKSVFQV VVEASNEVRS GIVYATLIII LVFVPLFALS GIEGRLFAPL GQAYIISILA
SLLTSITLTP VLASLLLPGL RNLEEHDSRF LKLLKRGNAA LLRVAFRHKG WLVGSVAVAV
AAAGVAAWNL PRAFLPPFNE GSFTVSMTFN PGISLAESNR VGLIAEKLLL DIPGVKAVGR
RTGRAELDEH AEGVHSSEID VALDEGTKRP KEALVADIRG RLAALPVAVN VGQPISHRLD
HMLSGVRAEI ALKVFGDDLD ALRRVANSLR DRMASIPGLA DLQVERQVRI PQLEVRVDYT
RAALYGVQPA AVVEQISRLS NGRVVSTVVD GVRRFDVVLR LAENRRTTTG LGDLLLETPS
GWVPARQVAD IRETDGPNQI LRENARRRIV VQANTTAGTD MATVVAAIRE AVAKEPMPPG
FFTSLEGTFQ AQEEASRTIA ALSALSLALV FAILFSRYRS AALALIIMGN VPLALIGSVA
ALWLVGQPLS VASMIGFITL TGIAARNGIL KISHYLNLSL HEGMPFGPDL VVRGSLERLT
PVLMTALSAG VALVPLLYDA ASPGKEILHP VAVTIFGGLV SATLLDTFLT PVLFLRFGRK
PLERLHALHA EAPADPSPDG ARPRPAEAY
|
|---|
| |