Gene Mpop_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4089 
Symbol 
ID6311848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4363200 
End bp4366427 
Gene Length3228 bp 
Protein Length1075 aa 
Translation table11 
GC content68% 
IMG OID642652784 
Productacriflavin resistance protein 
Protein accessionYP_001926742 
Protein GI188583297 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.320158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCACGC TCCTCGTCAC GCAATCCCTG CGCAACCGCC TCCTCGTACT GGCGCTTGCC 
GCGGTGCTCG TCATCTACGG TGCCTTCACC GCGACCAAGC TTCCGGTCGA CGTATTCCCG
GACCTCAATC GGCCGACGGT GACGATCATG ACCGAGGCCG AGGGACTCGC CCCCCAGGAG
GTCGAGCAGC TCGTCACGTT CCCGGTCGAG ACGCAGATGA ACGGCCTGCC GGGCGTGACC
CGGGTGCGTT CCGTGTCCGG CGTCGGCCTC TCGGTGATCT ACGTCGAGTT CGACTGGGGC
ACCGACATCT ACCGCAACCG CCAGCAGGTC GCCGAGCGCC TCGCGATGGT GCGCCCGCAA
CTACCCCCAA ACGTCAACCC GATGATGGGT CCGGTCTCCT CGATCATGGG CCAGATCGTG
ATGGTCGCCC TCAACGGCGG CACGGTCTCG CCGATGCAAT TGCGGGAACT CGCCGACTTC
ACCATCCGAC CACGCCTGCT CTCGATCCCC GGCGTCGCCC AGGTGATCCC GATGGGCGGC
GAGGTGCGCC AGTTCCGCGT CGCGCCCCAG CCCACGGCCC TGCGGGCGCT CGGCGTCACC
CATGGCCAAC TGGAGACGGC GCTGGCTCAG TTCGGCACCA ACACCGGCGG CGGCTTCACC
GACCAGTACG CCCGCGAGTA CCTGATCCGG AACCTCGGCC GGAGCATGAG CCTCGACGAC
CTGCGCAACA TGGTCGTCGC CACCGTCAAC GGCCGACCGA TCTACCTGCG GCAGGTGGCC
GAGGTCTCCT TCGCGGCCCG GGTGAAGCGG GGTGATGCCG GTTACATGGG CGCGCCCGCG
GTCGTGGTCT CGGTCGAGAA GCAGCCGGCC GTCGACACGG TGCGGCTCAC CCGCGAGGTC
GAGACGGCCC TCGCGGAGAT CACCGCCAGC CTGAACGCCT GCGGCCCCGA CGCGGGCAAG
GGCAGCTCGG ATCGGACGGG TCCGTCCGTG GCCGAACCCG TCGGCGAGGC ATGCGCCTTC
AAGGGCGTGC GCGCCGACCA GCTCATCTTC CGGCAGGCGA ACTTCATCGA GACCTCGATA
CGCAACGTCG AGACGGTGCT GATGGAGGCC GTCGTCGTCG TCGCGGTGGT GCTGTTCGCC
TTCCTCTTGA ACGTGCGCAC CACCGCGATC TCGCTCACGG CGATCCCGGT CTCGATCCTG
GCGACCGCGG TCGTGTTCCA CCTCGCCGGG CTGTCGATCA ATACGATGAC CCTTGGCGGC
CTCGCCATCG CCATCGGCGA ACTCGTCGAC GACGCGGTGG TCGACGTCGA AAACATTTTT
CGGAGACTCG GCGAGAACCG TAAAGCGGGT AACCCCAAAA GCGTCTTCAC AGTCGTGGTA
GAGGCCTCGA ACGAGGTGCG CTCCGGCATC GTCTACGCCA CTATGGTGAT CGTGCTGGTG
TTCGTGCCGC TCTTCGCCCT GTCGGGCATC GAGGGCCGGC TCTTCGCCCC GCTGGGTCAG
GCCTACATCG TCTCGATCCT GGCGAGCCTC CTCGTCTCCA TCACCCTGAC GCCGGTGCTG
GCCTACTACC TGCTGCCGGG CCTCAAGCGA CTGGAGGAGC ATGACAGCCA ATTCCTCAAG
TGGCTTAAGC GCGGGAACGC CGCCCTGCTG CGCGGCCTGC TCGGGCATGG CCGGCCGGTC
ATGGCGGTCG CCGGTCTGGC GGTGGCGGCG GCCGGGCTCG CGGCGACCTT CCTGCCACGC
ACCTTCCTGC CGCCGTTCAA CGAGGGCTCG TTCACGGTCA ACATGACCTT CAACCCCGGC
ATCTCGCTGG CCGAGAGCAA CCGGATCGGA CTGGTGGCGG AACGGCTGCT CCTGGAGATG
CAGGACGTGA AGTCCATCGG TCGCCGCACC GGCCGGGCCG AGCTCGACGA GCACGCGGAA
GGCGTCCACT CCTCCGACCT TGAGATCGAC CTGAAGCCGG GGTCGCGACC CAAGCCCGAA
CTCGTCACCG ACATCCGCGG GCGCCTCGCG GTGCTGCCCG TCAGCGTCAA CGTCGGCCAG
CCGATCTCGC ACCGGCTCGA CCACATGCTC TCGGGCGTGC GCGCCGAGAT CGCGCTCAAG
ATCTTCGGCG AGGATCTCGA CACCCTGCGC GCGCTCGCCG AGGACACGAG GGCGCGGCTC
TCGGACATCC CCGGCCTCGC CGACCTCCAG GTCGAGAAGC AGGTGCTCAT CCCCCAGTTG
GAAATTCGCG TCGACTATGC CCGCGCGGCC CTCTACGGCG TCCAACCCGC GGCCCTGGTC
GAGCAGTTGA GCCGCCTGTC GAACGGGCAG GTGGTCTCGC GGGTGGTGGA CGGCTACCGC
CGCTTCGACG TGGTGATGCG CCTCTCCGAC ACGATGCGCA CGACCCAGCG CCTCGGCGAC
CTCCTCATCG AGACCCCGTC CGGCTGGGTG CCGGCCCGCC AGATCGCCGA CATCCGCGAG
ACCGACGGGC CGAACCAGAT CCTGCGCGAG AACGCCCGGC GCCGCATCGT CGTGCAGGCC
AACACCCAAC CCGGCTCCGA CATGGGAAAG ATCGTCCAGG CCATCCAGGA GAAGGTCGCC
GCGGCGAACT TGCCCAACGG GTACGCCACG AGCCTGGAGG GCTCTTTCCA GGCCCAGGCA
GAGGCGAGCC GGACCATCGG CCTGCTGTCG CTGCTCTCCC TCGCCCTGGT CTTCGCGCTG
CTCTACTCCC GTTACCGCTC GGTCGTCTTC ACGCTGATCA TCCTAGGCAG CATCCCGCTC
GCCCTGATCG GCTCGGTGGC CGCCCTTTGG ATAGCCGGGC AACCACTCTC GGTCGCCTCG
ATGATCGGCT TCATCACGCT GACCGGCATC GCCACCCGCA ACGGCATCCT CAAGATCAGC
CACTACCTGA ACCTTGCCAT CCACGAGGGC ATGCCGTTCG GGCGCGACCT CGTCATCCGC
GGCAGCTTGG AGCGGCTGGC GCCGGTCCTG ATGACGGCGC TCTCGGCGGG CGTCGCCCTG
GTGCCGCTGA TGATCGGCGC CGACGCGCCG GGCAAGGAGA TCCTGCACCC CGTGGCGGTG
ACGATCTTCG GCGGCCTGAT CAGTGCGACG CTGCTCGACA CCGTGCTGAC CCCGGTGCTG
TTCCTGACCT TCGGCCGCAA GCCCCTGGAG CGGCTGCGGG ACGAGGCCCG TCACCGCCCC
GAGGCTTCAC CCGAGGCACC GAGAAGTTCG CCCGTCGAGG CGTTCTGA
 
Protein sequence
MFTLLVTQSL RNRLLVLALA AVLVIYGAFT ATKLPVDVFP DLNRPTVTIM TEAEGLAPQE 
VEQLVTFPVE TQMNGLPGVT RVRSVSGVGL SVIYVEFDWG TDIYRNRQQV AERLAMVRPQ
LPPNVNPMMG PVSSIMGQIV MVALNGGTVS PMQLRELADF TIRPRLLSIP GVAQVIPMGG
EVRQFRVAPQ PTALRALGVT HGQLETALAQ FGTNTGGGFT DQYAREYLIR NLGRSMSLDD
LRNMVVATVN GRPIYLRQVA EVSFAARVKR GDAGYMGAPA VVVSVEKQPA VDTVRLTREV
ETALAEITAS LNACGPDAGK GSSDRTGPSV AEPVGEACAF KGVRADQLIF RQANFIETSI
RNVETVLMEA VVVVAVVLFA FLLNVRTTAI SLTAIPVSIL ATAVVFHLAG LSINTMTLGG
LAIAIGELVD DAVVDVENIF RRLGENRKAG NPKSVFTVVV EASNEVRSGI VYATMVIVLV
FVPLFALSGI EGRLFAPLGQ AYIVSILASL LVSITLTPVL AYYLLPGLKR LEEHDSQFLK
WLKRGNAALL RGLLGHGRPV MAVAGLAVAA AGLAATFLPR TFLPPFNEGS FTVNMTFNPG
ISLAESNRIG LVAERLLLEM QDVKSIGRRT GRAELDEHAE GVHSSDLEID LKPGSRPKPE
LVTDIRGRLA VLPVSVNVGQ PISHRLDHML SGVRAEIALK IFGEDLDTLR ALAEDTRARL
SDIPGLADLQ VEKQVLIPQL EIRVDYARAA LYGVQPAALV EQLSRLSNGQ VVSRVVDGYR
RFDVVMRLSD TMRTTQRLGD LLIETPSGWV PARQIADIRE TDGPNQILRE NARRRIVVQA
NTQPGSDMGK IVQAIQEKVA AANLPNGYAT SLEGSFQAQA EASRTIGLLS LLSLALVFAL
LYSRYRSVVF TLIILGSIPL ALIGSVAALW IAGQPLSVAS MIGFITLTGI ATRNGILKIS
HYLNLAIHEG MPFGRDLVIR GSLERLAPVL MTALSAGVAL VPLMIGADAP GKEILHPVAV
TIFGGLISAT LLDTVLTPVL FLTFGRKPLE RLRDEARHRP EASPEAPRSS PVEAF