Gene Mpop_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4001 
Symbol 
ID6312057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4269230 
End bp4271272 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content70% 
IMG OID642652699 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001926658 
Protein GI188583213 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.504416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCA ATGCCGACGC GCTTCTGAAG CCCCTCACCA TCAAGGGCCT CACCATCCGC 
AACCGGGTGA TGTCCACGAG CCACGCCCCC GGCTACGGCC GGGACGGCAA GCCGCAGGAG
CGCTACCAGC TCTACCACGC CGAGAAGGCC AAGGGCGGCA TCGGGCTCAC CATGTTCGGC
GGCTCGTCGT CGGTGGCCGT CGACAGCCCC GCCGCGCCCT GGAACCAGAT CTCGGTCGCC
GACGACTCGG TGATCCCGTT CTTCCGACAG TTCTCCGACC GGGTGCACCA GCACGGCGGC
AAGCTGATGA TTCAGCTCAC CCATATGGGC CGGCGCACCA AGTGGGACAC CGAGCACTGG
CTCCCCACGG TCTCGCCCTC GCCCCGGCGC GAGCCCGCCT CCCGCACCAT CCCGAAGGAG
ATGGAGGCGG AGGACATCGC CCGCATCGTC AAGAGCTTCG CCCAGGCCGC CCGGCGCTGC
CGCGAGGGCG GGCTCGACGG CTGCGAGGTC TCGGCCGCCC ACGGCCACCT GATCGACCAG
TTCTGGTCGC CGTCGGTCAA CCAGCGCACC GACCGGTACG GCGGCAGCCT GGAGAACCGG
ATGCGCTTCG GCATCGAGGT GCTGGAGGCG ATGCGCGCGG AAGTGGGCGA CGACTACGTC
ATCGGCATTC GCATGTCGGG CGACGAGATG ATCGCCGACG GCCTCAGCCA GGAGGATTGC
CTGACGATCG CCACGGAATA CGCGCGGCGC GGACTGGTGG ACTTCCTCAA CATCCTCGGC
GGCCAGGCGC GCGACCACAT CGCCCACGCG ATCTCGCTGC CGAACATGTC CTTCCCGGTG
GCGCCGTTCC TGTTCCTGCC GAGCGCGATC AAGCGCGAGG TCGACGTGCC GGTGTTCCAC
GCCCAGCGCG TGACCGATCT CGCCACCGCG GCGCGTGCGG TCGCCGAGGG GCACGTCGAC
ATGGTGGCGA TGACCCGCGC CCACATCGCC GACCCGCATC TGGTCAAGAA GCTGTCCGAG
GGCCGGGCCG ACGACATCCG GCAATGTGTC GGCGCGGGCT ACTGCATCGA CCGGATCTAT
GTTGGCGGCG ACGCGCTCTG CATCCAGAAC GCCGCCACCG GCCGCGAGGC GAGCATGCCC
CACGAGATCC GCCGGGCGGA TCTCCGCCGC CGCGTGGTGG TGATCGGCGC CGGCCCCGGC
GGGCTGGAGG CGGCCCGCGT CTGCGCCGAG CGCGGCCACT CCGTGGTGCT GTTCGAGAAG
AGTGCGGTGG CCGGCGGACA GATCGGCATC GCGGCCAAGG CCGGCTGGCG CGAGGCGATG
TCGGGCATCA CCCGCTGGCT CGTCTCGCAG GTGACCAAGC TCGGCGTCGA TCTGCGCCTC
GCCACCGAGG CGACGGAGGA AGCGGTGCTG GCGGAGAAGC CCGACGTGGT GATCGTCGCC
ACCGGCGGCA CGCCGTTCCG CGGCCACGCC AAGGGCGCCG CGCAGCACGC GGTGACCACC
ACCGAGGTGC TGACCGGCGC GGTCGAGCCC ACCGGCTCGG TGCTGCTCTA CGACGAGATG
GGCGGGCACA ACGCGGCCTC GGTGGCCGAG CACCTGGCCA AGCGCGGCTG CCTCGTCGAG
ATCGCCACCC ACGACCGCAT GGTGGCGGAG GAGGTCGGCA CCACGAACCA GCCGATCCAC
CTGCGCGAAC TCTACAAGCT CGGCGTGGTG ATGAGCCCGA ACATGGAGCT GATCGAGATC
TATCCGGAGG GCAACCGCTT CGTCGCCGCC TTGCGCAACA CCATGACCGA TGCCGAGGAG
GAGCGCCTCG TCGACCGCAT CGTCGTCGAT CACGGCACGC TGCCGGTGGA TGAGCTCTAC
CACGGCCTGA AGCCGGCGTC GGTCAACCGG GGCCAGACCG ACCCAGACGC GCTGATCCGC
GGCGAGCCGC AGCCCTACGA CCTGTCGAAG GGCTACGCGC TCTACCGCAT CGGCGACGCG
GTGTCCGGCC GCAACATCCA CGCGGCGATC TACGACGCCC TCCGGTTGTG CAAGGATCTT
TGA
 
Protein sequence
MIANADALLK PLTIKGLTIR NRVMSTSHAP GYGRDGKPQE RYQLYHAEKA KGGIGLTMFG 
GSSSVAVDSP AAPWNQISVA DDSVIPFFRQ FSDRVHQHGG KLMIQLTHMG RRTKWDTEHW
LPTVSPSPRR EPASRTIPKE MEAEDIARIV KSFAQAARRC REGGLDGCEV SAAHGHLIDQ
FWSPSVNQRT DRYGGSLENR MRFGIEVLEA MRAEVGDDYV IGIRMSGDEM IADGLSQEDC
LTIATEYARR GLVDFLNILG GQARDHIAHA ISLPNMSFPV APFLFLPSAI KREVDVPVFH
AQRVTDLATA ARAVAEGHVD MVAMTRAHIA DPHLVKKLSE GRADDIRQCV GAGYCIDRIY
VGGDALCIQN AATGREASMP HEIRRADLRR RVVVIGAGPG GLEAARVCAE RGHSVVLFEK
SAVAGGQIGI AAKAGWREAM SGITRWLVSQ VTKLGVDLRL ATEATEEAVL AEKPDVVIVA
TGGTPFRGHA KGAAQHAVTT TEVLTGAVEP TGSVLLYDEM GGHNAASVAE HLAKRGCLVE
IATHDRMVAE EVGTTNQPIH LRELYKLGVV MSPNMELIEI YPEGNRFVAA LRNTMTDAEE
ERLVDRIVVD HGTLPVDELY HGLKPASVNR GQTDPDALIR GEPQPYDLSK GYALYRIGDA
VSGRNIHAAI YDALRLCKDL