| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3946 |
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| Symbol | |
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| ID | 6312185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4201234 |
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| End bp | 4204431 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642652648 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001926608 |
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| Protein GI | 188583163 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.213913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA ACAAGATGCT CATCGACGCG ACGCATCCGG AGGAGACCCG GGTCGTCACC
GTCCAAGGCT CGCGGGTCGA GGAATTCGAT TTCGAGGCGG CCAACCGCCG GCCTCTGAGA
GGCAACATCT ATCTCGCCAA GGTCACCCGC GTGGAGCCCT CGCTCCAGGC GGCCTTCGTC
GAGTACGGCG GCAACCGCCA CGGCTTCCTC GCCTTCAACG AGATCCACCC CGACTACTAC
CAGATCCCGA TGGCCGACCG CCTCGCGCTG ATCGAGGCCG AGGCGCGCGA GGAGGAGGAG
CACCGCGAGC GCGAGGAGCG CCGTCCGCCG CGGGGCCGCC GCTCGCGCGG ACGCCGGGCC
GAGGCCCGCG GCTCGCGCCA CGACGACACG GTGAAGTCGC AGGAGGCGAT CGCGGAGACC
GTTTCCGAGA ACGACGCGAT CCCCGGCGAG GGCCAAGCCG CCGACGCGCC CGCGCCGGAG
GCGATCGAGG CTGTGCGCGC CGCCCTCGTC GAAGAGCGGC CCCTGGGCGA CGAGCCCGCC
GCCGAATCGA ATCCCGAATC CAGCGCCGAG CCGGTCGAGA CCGGCGGCGA CGCCTCCGCG
AGCCTGCCCG AAGCGGCGCT GGCGCCGGGC GCGCCCGCGG GCGACGCACC GGCCGAGCCG
GCCGCCGAGT CCGGCGAGGC TCCCGCCGCG CCGGCTGCCA CGGTCGAGCC GTCCGATATC
GCCGCGATCT CCGAGGCCCC CAATCCGCCG GTCGAGGCCG CGGAGTCCGC GGATGCCGCC
GAGACGGTCG AGCCGCAGCC CGTCGCCGCC TCCGCACCGG TCTCCGAGAC CGTGGAGATG
GACGAGGACG AGGATTCCGA CGACGCGTCC GAGGACGACG AGTCCGACGA GGATGAGGAC
GACGAGGATT CGGACGAGGA CGAGTCCGAC GACGATGACG ACGATTCGGA CGACGAGGAA
GAGGACGAGG AATCCGAGGA CGGCGAGGCG CGGGTCGCGC AGGTCGGCGG CGCGGGCGAC
GCGCTTGCCG AGATCCCCGA GCGCCCGCGC GCCTATCGCC GCCACTACAA GATCCAGGAG
GTGATCAAGC GCCGCCAGAT CATCCTCGTT CAGGTCGTCA AGGAAGAGCG CGGCACCAAG
GGCGCGGCGC TCACCACCTA CCTATCGCTC GCCGGCCGCT ACTCGGTTCT GATGCCCAAC
ACCGGTCGCG GCGGCGGCAT CTCCCGCAAG ATCACCTCGG CCGCCGACCG CAAGCGCCTG
AAGGAGGTCG TGGCCGACCT CGACGTGCCG GAGGGGATGG GGATCATCCT GCGCACGGCC
GGCGCCTCGC GCACCAAGCC GGAGATCAAG CGCGACTTCG AGTACCTGAT GCGCCTGTGG
GAGAGCGTGC GCGAGCTGAC GCTGTCCTCC ACCGCCCCGG CGCTCGTCTA CGAGGAGGGC
TCGCTGATCA AGCGGGCGAT CCGCGACCTC TACAACAAGG ATCTCGACGA GGTTCTGGTC
TCCGGCGAGG ACGCCTACCG CGAGGCCAAG GACTTCATGC GGATGCTGAT GCCCGGCCAG
TCGAAGGTGG TGAAGCCCTA CCGCGACCCG ACGCCGATCT TCGCCCGCTA CGGCGTCGAG
CAGCAGCTCG ACGCGATGTT CTCGACCCAC GTGGCGCTGC GCTCCGGCGG CTACCTCGTC
ATCAACCCGA CCGAGGCGCT GGTCTCGATC GACGTGAACT CGGGCCGCGC CACCCGCGAG
CACGACATCG AGGACACCGC GCTCAAGACC AACCTCGAGG CGGCGGAAGA GGTCGCCCGA
CAGGTGCGCC TGCGCGACCT CGCCGGCCTC GTCGTGATCG ACTTCATCGA CATGGAGGAG
AAGCGCAACA ACCGGGCGGT GGAGAAGCGG CTCAACGAGG CGCTGAAGAA CGACCGGGCG
CGCATCCAGG TCGGGCGGAT CTCGCCCTTC GGCCTCCTGG AGATGAGCCG CCAGCGCATC
CGCACCGGCG TGCTCGAATC GTCCTCGATC CCCTGCGCCC ATTGCGGCGG CTCGGGCTTC
GTGCGGGCGA CCTCCTCGGT GGCCCTGCAC ATCCTGCGCT CGATCGAGGA GGCGCTGCTC
AAGTCGTCGA GCCATAACCT CGTGCTGCGC ACCCGCACCG AGGTGGCGCT CTACATCCTC
AACCAGAAGC GGGCGCATCT CTACGACCTC GAGCAGCGCT TCTCCGTGGC GATCACCATC
TCCGCCGACG AGCGGCTGGC GGCGACCGCG GCGTTCCAAC TCGACCGTGG CGAGCCGGCG
GTGAAGCATG TCGGCCCGGC AACGGGCGTG CGTGCGGTCG CGATCTCCCC GGTCTACGAG
GCCGAGGAGT TCGAGGACGA GGTGCTCGAG TCCGAGGACG ATCTGCGGGA CGGCGAAGAG
GCCCGAGCGG ACGAGCCGAG GGGCGAGCGG TCTGCCGACG AGGCCGAGGC CGAGGGCGGC
GAAGGCCGTG CGGAGGGCTC CGAGGAGGGC GGCGGGCGTC GCCGTCGCCG TCGCCGTCGC
CGCGGCGGGC GTTCCTCCGG TGAGGAGGCC CGCGCGCAGG ACGGGCAAGA GCCTGAGAAC
GAGTCCGGGA ACGGGTCGGA CGCCGAGTCG GATGGGTCCG AGGACGGCGA CGAGGCTCCC
GAATCCGAGG CCGCCGACGA GGTGGCTGGC GCCGGGGCCG AGCGGGACGA AACCGTGTCC
GAGGCCGGCG AGGCCCCTGG TGAGGCCAAC GGCGAGGATG AGGGCAACGG ACGCCGCCGC
CGCCGCGGGC GCCGGGGCGG CCGGGGCCGC GGCCGGAACG AGCGCAGCGA GCGTCAGGAT
TCCGAGTTCG ACGACGAGGC CGGCGAGGCG CGGGCTGCGG AGACACATCC CCAGGAGACG
CATCCCCAGG AGACACATCC CGAGGAGACC GCCTCCGACG CCCTGCCGGT CGGCCCCGAG
GAGCCGGTCA GCGATGCCGA CGTGACCGCC GTCTCGCTCG CCGCCGGCAA CGGTGCCGCG
GCCGAGCCGC CCCCGGTCGT GCCCGCGCCG GAGCCCGAGC CGATCCAGGC CGAGTCCGTC
GCGCAGGCCG CGTCCGAGGC GGCGGCCCCT GAACCCGCGC CGGAGCCGGT CGCGGTGGTG
CTGACGCCCC CCGATCCGAA CCGCCCCAAG CGGGCCGGCT GGTGGTCGCG CACCAAGGCG
GCGCTGTCGG GAGAGTAG
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| Protein sequence | MANNKMLIDA THPEETRVVT VQGSRVEEFD FEAANRRPLR GNIYLAKVTR VEPSLQAAFV
EYGGNRHGFL AFNEIHPDYY QIPMADRLAL IEAEAREEEE HREREERRPP RGRRSRGRRA
EARGSRHDDT VKSQEAIAET VSENDAIPGE GQAADAPAPE AIEAVRAALV EERPLGDEPA
AESNPESSAE PVETGGDASA SLPEAALAPG APAGDAPAEP AAESGEAPAA PAATVEPSDI
AAISEAPNPP VEAAESADAA ETVEPQPVAA SAPVSETVEM DEDEDSDDAS EDDESDEDED
DEDSDEDESD DDDDDSDDEE EDEESEDGEA RVAQVGGAGD ALAEIPERPR AYRRHYKIQE
VIKRRQIILV QVVKEERGTK GAALTTYLSL AGRYSVLMPN TGRGGGISRK ITSAADRKRL
KEVVADLDVP EGMGIILRTA GASRTKPEIK RDFEYLMRLW ESVRELTLSS TAPALVYEEG
SLIKRAIRDL YNKDLDEVLV SGEDAYREAK DFMRMLMPGQ SKVVKPYRDP TPIFARYGVE
QQLDAMFSTH VALRSGGYLV INPTEALVSI DVNSGRATRE HDIEDTALKT NLEAAEEVAR
QVRLRDLAGL VVIDFIDMEE KRNNRAVEKR LNEALKNDRA RIQVGRISPF GLLEMSRQRI
RTGVLESSSI PCAHCGGSGF VRATSSVALH ILRSIEEALL KSSSHNLVLR TRTEVALYIL
NQKRAHLYDL EQRFSVAITI SADERLAATA AFQLDRGEPA VKHVGPATGV RAVAISPVYE
AEEFEDEVLE SEDDLRDGEE ARADEPRGER SADEAEAEGG EGRAEGSEEG GGRRRRRRRR
RGGRSSGEEA RAQDGQEPEN ESGNGSDAES DGSEDGDEAP ESEAADEVAG AGAERDETVS
EAGEAPGEAN GEDEGNGRRR RRGRRGGRGR GRNERSERQD SEFDDEAGEA RAAETHPQET
HPQETHPEET ASDALPVGPE EPVSDADVTA VSLAAGNGAA AEPPPVVPAP EPEPIQAESV
AQAASEAAAP EPAPEPVAVV LTPPDPNRPK RAGWWSRTKA ALSGE
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