| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3871 |
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| Symbol | |
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| ID | 6312339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4116119 |
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| End bp | 4117573 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642652573 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001926533 |
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| Protein GI | 188583088 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0231495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACG CCCTATCTCC GCCGGCCCGC GTCCTGCTGC TGAGCGCCGG CCTCGCCTGC
GCCCTGCCGT TTTTCGAGAC CTCCGCCCTG GCGCAATCGC CGAGCGCGGT CGAGAGCTTT
ACGGGTGAGG CGGGTCCGCG CACCGATCCG GAGGCGATCG GCGTCGCGCC GGACGGCAAG
GTGAAGTGGC ACGGGCCGCT CGCGCCCTAC GCCGCCTCGC TGGCGCTCGC GGGCCTGAGC
TTCGACGTCA ACGTCTACGA CTTCTTCTTT GCAAATCCGA GTGCGGGCCT GCGGCCGGGA
CAGCTCTCGA ACTCGGCCTA TTACCTGCTG AGCCTCGACG CGGATCTGGA GAAACTCGCG
GGGGTTCCGG GCGGCTTCTT CCACATCACC CAGACCTTCT TCGGCCTGCG CTGGAACAAC
CGCAACATGG GCGCCGACAT CGGCGACACC ACGATCGGCT ACCAGCCGAC CTTCAACCGC
GACGTCGCCC GGCTCTCGAT CCTCACCTAC GAGCAGCGCC TGCTCGACGA CCGCCTCGCC
ATCGAGGTCG GGCGCACGCA CCCGAACCGC TACTACGCGC TGCCGCCCTG CCAATCGAGC
GTGAGCTGCT TCCAGGACAT CCTGCAGATC AATGCCGGCC TGTCCTCGCC GCTCTACGGT
GTCTGGGGCG CCAACGTCGC CTACAAGACC TCTCCCGAGG ACTACATCCA GGCCGGCGCC
TTCGCGGTCA CGGGCCGCGC GAACTTCACC TCGGGCTGGG ATTTCGGCCA CGAGCCGCTC
AACGGCGTCG TGACGCTGGC CGAGATCGGC CACGCCACCA CCTTCGTCAC CGATCCCTAT
CCGAGCCGCG TGGCGCTGAC CGGCTTCTAC AACACCGCCG ACCACGAAGA TAACTTCAAA
ACCATCTACG GCACCTCGAA GGGGCTCAAC CCGAGCGATC CGGTGCGGCT GCGCTCGGGC
ACGTCGGGCG TGATCCTCAC CGGCTCGCAG GTGGTCTGGC GCGCCGACGG CGGGGCGGAC
GCGTCCAACC TCAACCCGAC CTCGATTCAG GCCTATACCA GCCTCGCCTA CGCCCCCGAC
CCGACGGTGC CGATCCGCTG GAACGCGTTC GCCGGCCTCA CCCTCCAGGC GCCCGACCAG
AGCCGGCCGC TCGACCGCTA CGGCGTCAAG GTCAACTGGC AGCGCATCTC CACCGACTAC
GCGCAGTTCC TCGGCGACGC GAACTTCATC TCCGGCGGCA GCGGCGAAAT CTATTCCCGT
GACAAGCTGA TCTTCGAGGC CAACGCCCAT CTGGCGCTCG GCAAGGGCAT CTTCTTCGAG
CCGGTGGTCC AGTACCTCGT CAACGGCAAC GCGTTCTGGA ACCCCTACAC CGCCAACCGC
ACCAAGGACG GCTTCTACGT CGGCGCCACG CTGATCGTGC CGCTCGGCCA GTTGCTCGGC
CTCGCGCCGG GCTGA
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| Protein sequence | MPNALSPPAR VLLLSAGLAC ALPFFETSAL AQSPSAVESF TGEAGPRTDP EAIGVAPDGK
VKWHGPLAPY AASLALAGLS FDVNVYDFFF ANPSAGLRPG QLSNSAYYLL SLDADLEKLA
GVPGGFFHIT QTFFGLRWNN RNMGADIGDT TIGYQPTFNR DVARLSILTY EQRLLDDRLA
IEVGRTHPNR YYALPPCQSS VSCFQDILQI NAGLSSPLYG VWGANVAYKT SPEDYIQAGA
FAVTGRANFT SGWDFGHEPL NGVVTLAEIG HATTFVTDPY PSRVALTGFY NTADHEDNFK
TIYGTSKGLN PSDPVRLRSG TSGVILTGSQ VVWRADGGAD ASNLNPTSIQ AYTSLAYAPD
PTVPIRWNAF AGLTLQAPDQ SRPLDRYGVK VNWQRISTDY AQFLGDANFI SGGSGEIYSR
DKLIFEANAH LALGKGIFFE PVVQYLVNGN AFWNPYTANR TKDGFYVGAT LIVPLGQLLG
LAPG
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