Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3854 |
Symbol | |
ID | 6312351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4100670 |
End bp | 4102841 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642652556 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_001926516 |
Protein GI | 188583071 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC ATCGTACAAC GCGCACGCTC GGGCGGGCCG CCGGAAAGGC CTCGGCGGCG GAGCCGGTCG ATCGCTACCT CGCCAAGGCG GCGACGCACC GGGTGGCCGG CCGGTTCGAC AAGGCGCGCC GCAACCTCCG GATGGCGCTC GACGCGGTGC CGGGCCACGC CGCCGCGCAT TTCGAACTCG GGCTGCTCAC CAACCGGACC GAGGCGCCAG CCGCCGCGGT GCCCCACTTC GTCGAAGCCC TCAGGGCCGC GCCCGAGCGG CCGGCCTACT GGCTCGCGCT GGCCACCACG CTGCTGACGC TGAACCGCGT CGGCGAGGCG CGCGCGCTGA TGGAGCGCTT CCGCGACAAG GGTTTGCCCG ACGACGAGAC TCGCCGGGTC CTCAAGGACT TCGTCGAACA GGCGTTCACG CTGGGCCAGG CGCATTACGA GGCGAACGAT CTGACCACCG CGGAGATCCT GCTCGACCTC GTCATCGGCC TGGACGACAC CCACGCCAAG GCGACCCATC TCGCCGGCGC CGCCGCCGCC CGGCGCGGCC ATCATCAGCA GGCCTACGAC CTGTTCAGCA TCGCCATCTA CCGCGAGCCG GACAACGCCG CCTTCTTCAG CAGCCTCGGC GCGCTCCTGA TCATCCTCGG GGACAACTCG GGTGCGATCG CGGCGCTGGA AAAGGCCGTC ACGCTCGATC CGGATCTGGC CATCGCGCAT TCGAACCTGT CCGGCGCGTT CCAGCGCGTC TCCCACCACG CCTCGGCCGT GAGCCATGCG CAGCGCTCGA TCGCGCTCAA TCCGAACTTC TCCGGCGCCC ATATCAACCT CGGATGCGGC CTGAAGAGCC TCGGCCGCCT GCCTGAGGCG ATCGCGAGCT TCGACCGGGC GCTGGCCCTC GATCCGCGCA ACGTCGCGGC CCATTCCAAC CGGCTCTTCG CCAAGCTCTA TTCCGAGGGC GTCTCCCCCG AAGACTACGC CGCCGACGCG CGGAGCTTCG GGACGCGCCT CGCCGAGCCG CTCCTGCGGC GGCGGCCCTT CACCAACGAT CGCGATCCCG ACCGTCGCCT GCGGGTCGGG TTCGTCTCGG CCGACCTCTG CACCCACGCC GTCGCCCGGT TCATCGAGCC GTTCATGCGC CACATCGATC GCGAGCGGTT CGAGACGCGC GCCTACATGA CCCAGGCCGG GGAGGATGCG GTCTCGGCCC GCCTGCGCCT GCTCTTCGAC GGCTGGCACA ACATCGCCGC CCTCGACGAC GACGCGGCCG CCGACCTGAT CGAGGCGGAC GCCATCGACA TCCTCGTCGA CCTGTCGGGC CACAGCGCCG GCCACCGGCT GCTCGTTTTC GCCCGCAAGC CGGCGCCGGT CCAGGTCACC TGGATCGGCC ACCCGGCGAC GACGGGCCTG CGCGCCATGG ACTACCGCCT GACGGATTTC GGCCACGACG AGCCCGGCTT GACCGAAGTG CTTCACACCG AGACGCTGTG GCGGCTTCCC TATCCCCTGA TGTGCGCCAC CTACGCGCCG CCGGAGGACA TCCCGCCCGT GCGCGGGTGT GCGCCGTTCG AGGATAACGG CTTCATCACG TTCGGCGTCA TGAATCGCTT CGAGAAGATC GGCGACCGGA CACTGGAGGC CTGGGCCGGC ATCCTGCGGG CGCTGCCCGA GTCGCGCTTG TTCCTGGTCG CCGCCGACGT GGACAAGCCG GAGGTCCGAG GACAGATCGA GGCGCGCCTG TCGCGCGCCG GGCTACCGCT GGACCGGATA CGCCTGCATC CTCGTGTCAC GAGCGGCTAC TATGCCCTCT ACTACGAGGT CGATATCGCC CTCGATTCCT TCCCCTACAA CGGCGGCACG ACGAGTTGCG ACACACTTTC CATGGGTGTC CCCCTGATCG CCCTTCACGG CAGCCATGCC GCCGATCGCG CCGCGGCCGC CATCCTGACC GCGGCGGGGC TGCCCGAGTT GGTGACCGAA ACGCGGGAGG ACTATGTGGC GCTGGCCATC GCCCTTGCGA GCGACCCTGT CCGCCTGCGC GCCCTCCGCT CGGGATTGCG CGAGCGCGTC TTCGCCAGCC CGCTCATGGA TCATGCGCGG CACGCCGCGG CGGCGGGTGA GGCCTTCCGC GCCATGTGGA GGCGCTGGGT CGATGCAGAT CGCTCCGCTT GA
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Protein sequence | MLEHRTTRTL GRAAGKASAA EPVDRYLAKA ATHRVAGRFD KARRNLRMAL DAVPGHAAAH FELGLLTNRT EAPAAAVPHF VEALRAAPER PAYWLALATT LLTLNRVGEA RALMERFRDK GLPDDETRRV LKDFVEQAFT LGQAHYEAND LTTAEILLDL VIGLDDTHAK ATHLAGAAAA RRGHHQQAYD LFSIAIYREP DNAAFFSSLG ALLIILGDNS GAIAALEKAV TLDPDLAIAH SNLSGAFQRV SHHASAVSHA QRSIALNPNF SGAHINLGCG LKSLGRLPEA IASFDRALAL DPRNVAAHSN RLFAKLYSEG VSPEDYAADA RSFGTRLAEP LLRRRPFTND RDPDRRLRVG FVSADLCTHA VARFIEPFMR HIDRERFETR AYMTQAGEDA VSARLRLLFD GWHNIAALDD DAAADLIEAD AIDILVDLSG HSAGHRLLVF ARKPAPVQVT WIGHPATTGL RAMDYRLTDF GHDEPGLTEV LHTETLWRLP YPLMCATYAP PEDIPPVRGC APFEDNGFIT FGVMNRFEKI GDRTLEAWAG ILRALPESRL FLVAADVDKP EVRGQIEARL SRAGLPLDRI RLHPRVTSGY YALYYEVDIA LDSFPYNGGT TSCDTLSMGV PLIALHGSHA ADRAAAAILT AAGLPELVTE TREDYVALAI ALASDPVRLR ALRSGLRERV FASPLMDHAR HAAAAGEAFR AMWRRWVDAD RSA
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