| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3518 |
|---|
| Symbol | |
|---|
| ID | 6311475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3751280 |
|---|
| End bp | 3751960 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642652241 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_001926203 |
|---|
| Protein GI | 188582758 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.553455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG AGATCGGCTT CCTCGTCTTC CCCCGGGTGC AGCAGCTCGA CCTCACCGGC
CCCTACGAGG TGTTGGCCAT GGTGCCGGAC ACCCGCGTGC ATCTCGTCGC GAAAGACCTG
ACCCCGGTCG CGAGCGCCAC CGGCCTCGTG CTGACGCCCA CGATCACCTT CGCCGAATGC
CCCGCTCTCG ACGTGATCTG CGTGCCGGGC GGCTCGGGCG TGAACCCGCT GATGGAGGAT
GCCGAGACCC TCGACTTCCT GCGCCGACAG GCGGAGCGCG CCCGCACCGT CACCTCGGTC
TGCACCGGCG CCCTGGTGCT CGGCGCCGCG GGCCTCCTGC GGGGCAGGCG CGCCACCACC
CATTGGGCGG CGCACGACCT GCTCGGCCCC CTCGGGGCGA TCCCGACGCA GGGACGCGTG
GTGCGCGACG GCAACCTGAT CACCGGCGGC GGCGTGACGG CGGGCATCGA TTTCGGCCTG
ACGCTTGCGG CGGAACTCGC CGACGAGGCC ACCGCGCGGG CGATCCAGCT CCATCTGGAA
TACGCCCCGG CCCCACCCTT CGAGGCCGGC CGGCCCGAGA CCGCGGGCCC CGAGACGCTG
GCCGCCGCCC GCGAGCGGCT GTCGGCGACG CGCCGGGAGC GGGAGGCGAT CGTGGCCCGG
CTCACGCAAG CGCAGGGTTA G
|
|---|
| Protein sequence | MTIEIGFLVF PRVQQLDLTG PYEVLAMVPD TRVHLVAKDL TPVASATGLV LTPTITFAEC
PALDVICVPG GSGVNPLMED AETLDFLRRQ AERARTVTSV CTGALVLGAA GLLRGRRATT
HWAAHDLLGP LGAIPTQGRV VRDGNLITGG GVTAGIDFGL TLAAELADEA TARAIQLHLE
YAPAPPFEAG RPETAGPETL AAARERLSAT RREREAIVAR LTQAQG
|
|---|
| |