Gene Mpop_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3512 
SymbolpyrB 
ID6311460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3744595 
End bp3745542 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID642652235 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001926197 
Protein GI188582752 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC AGACCGCACC CGCCTTCCCG CACCGGCACC TGCTCGGCAT CGAAGGCCTG 
AGCCGTCCGG ACATCGAGTC GCTCCTGGAG CGCGCCGACG CCGCCGTCGC CCTGTCGCGG
CAGGTGGAGA AGAAGCGCAC CACCTTGCGC GGGCGCACCC AGATCAACCT GTTCTTCGAG
CCCTCGACCC GGACGCAATC CTCGTTCGAG CTGGCCGGCA AGCGGCTCGG CGCCGACGTG
ATGAACATGT CGGTGGCCTC GTCCTCGGTG AAGAAGGGCG AGACCCTGAT CGACACCGCC
GCGACCCTGA ACGCCATGCG CCCCGACATC ATCGTCGTGC GCCACCATGC GGCGGGCGCG
GTGCATCTGC TGGCGCGCAA GGTCGATTGC GCCGTGGTCA ATGCGGGCGA CGGCGCCCAC
GAGCACCCGA CTCAGGCGCT GCTCGACGCG CTCACCATCC GCCGCAACAA GGGCGGCATC
GAGGGGCTCA CGGTCGCGAT CTGCGGCGAC GTGCTGCATT CGCGGGTCGC GCGCTCCAAC
ATCATCCTGC TCCAGGCGCT CGGTGCCCGG GTGCGGGTGA TCGGCCCCTC GACGCTGCTG
CCCACCGGCA TCGAGCGCTT CGGCGTCGAG GTGTTCACCA ACATGCGGGA GGGGCTGAAG
GGCTGCGACA TCGTGATGAT GCTGCGGCTT CAGCGCGAGC GCATGAACGG CTCTTTCGTC
CCCTCGGTGA AGGAGTATTT CCGCTATTAT GGCCTCGACG GCGACAAGCT GGCGCTGGCC
AAGCCCGACG CGCTGGTGAT GCATCCCGGC CCGATGAACC GCGGCGTCGA GATCGCCTCC
GACATCGCCG ACGGAGCGCA ATCGCTGATC CGCGAGCAGG TCGAGATGGG CGTCGCCGTG
CGGATGGCCG TGCTGGAAGC GCTGGCGACC CACCTGCCGA ACGGTTAG
 
Protein sequence
MTAQTAPAFP HRHLLGIEGL SRPDIESLLE RADAAVALSR QVEKKRTTLR GRTQINLFFE 
PSTRTQSSFE LAGKRLGADV MNMSVASSSV KKGETLIDTA ATLNAMRPDI IVVRHHAAGA
VHLLARKVDC AVVNAGDGAH EHPTQALLDA LTIRRNKGGI EGLTVAICGD VLHSRVARSN
IILLQALGAR VRVIGPSTLL PTGIERFGVE VFTNMREGLK GCDIVMMLRL QRERMNGSFV
PSVKEYFRYY GLDGDKLALA KPDALVMHPG PMNRGVEIAS DIADGAQSLI REQVEMGVAV
RMAVLEALAT HLPNG