| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3487 |
|---|
| Symbol | |
|---|
| ID | 6311102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3715829 |
|---|
| End bp | 3717016 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642652210 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_001926172 |
|---|
| Protein GI | 188582727 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.16157 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCA TGCCTCGGCC CATCCTGCGG CGCCCGCTCT CGGTGCTGCG CAGCACGCTC
GCCAACGAAT CGGCGGGCGG CCTCGTGCTG ATGGCCGCCG CGGCGGCCGC GCTCGTGGTG
GCGAACTCGC CCTTGGCCGA GGCGTATCAC CATGGGCTCC ACGTCTCCGT CGGGGCGATG
AGCCTGCTCC ACTGGGTCAA CGACGGCCTG ATGGTCGTGT TCTTCCTGCT GGTCGGGCTC
GAGATCAAGC GCGAGGCGCT CGACGGGCAG TTGCGCACCT GGCCGGCGCG GGTGCTGCCG
GGGCTGGCCG CGGGCGCGGG CATGGCGGCG CCGGCTCTCG TCTACCTCGC CTTCAATGCC
GGCCAGGCGA CCGCCCGAGG CTGGGCGATC CCGGCGGCCA CCGACATCGC CTTCGCCCTC
GGCGTGCTGG CGCTGCTCGG CTCGCGCGTG CCGGTCTCGC TCAAGATCTT CCTCTCGGCG
GTGGCGATCG TCGACGATCT CGGCGCGGTC GTCATCATCG CGCTGTTCTA TACGGGGCAG
ATCGACGGGG CGATGCTGGG CGCCGCCGCC GGCATCCTCG CCGCACTCTT CGCCCTCAAC
CGCCTCGGCG TTCGCGCGCT GGCGCCCTAC CTGCTCCTCG GCCTCGCGCT CTGGTTCGTC
GTGCTGCGCT CCGGCGTCCA CGCCACCGTA GCCGGGGTGC TGCTCGCCCT GTTCGTGCCG
ATCCACCCGA GCCCCGGCAA GCCCGAGGAC ACGACCTCGC CGCTGCACCG GCTCGAACAC
GGCCTGAGTC CCTGGGTGTC GTTCGTGATC GTGCCGATCT TCGGCTTCGC CAATGCCGGG
GTGACCCTGC TCGGCCTGCC GGCGCGGGCG CTGGTCGATC CCGTGACCCT CGGCGTGGCG
CTCGGCCTGT TCCTCGGCAA GCAGGTCGGC ATCTTCCTCA GCGTCCGGCT CGCCGTCGCG
ACGGGCCTTG CCGCCCGCCC GGCGGGGGCG ACGTGGCCCC AGGTCTACGG CGTGGCGCTC
CTGTGCGGGA TCGGCTTCAC CATGAGCCTG TTCATCGGTG CGCTCGCCTT CACCGACGGC
CTGCACGAAA CCGAGACGAA GCTCGGGGTG CTCGGCGGCT CGCTGCTGTC GGGCATCCTG
GGGGCGGCCC TGCTCGCGCG CTCCGCACTC AGGAAGCCAA GGGTCTGA
|
|---|
| Protein sequence | MKPMPRPILR RPLSVLRSTL ANESAGGLVL MAAAAAALVV ANSPLAEAYH HGLHVSVGAM
SLLHWVNDGL MVVFFLLVGL EIKREALDGQ LRTWPARVLP GLAAGAGMAA PALVYLAFNA
GQATARGWAI PAATDIAFAL GVLALLGSRV PVSLKIFLSA VAIVDDLGAV VIIALFYTGQ
IDGAMLGAAA GILAALFALN RLGVRALAPY LLLGLALWFV VLRSGVHATV AGVLLALFVP
IHPSPGKPED TTSPLHRLEH GLSPWVSFVI VPIFGFANAG VTLLGLPARA LVDPVTLGVA
LGLFLGKQVG IFLSVRLAVA TGLAARPAGA TWPQVYGVAL LCGIGFTMSL FIGALAFTDG
LHETETKLGV LGGSLLSGIL GAALLARSAL RKPRV
|
|---|
| |