Gene Mpop_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3393 
Symbol 
ID6311449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3621386 
End bp3621796 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID642652117 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001926079 
Protein GI188582634 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG TCACCGTCGA AGACTGCATC GAGAAGGTCG AGAACCGGTT CGAGCTGGTC 
CTGCTCGCCA GCCACCGCGC GCGCCTGCTC GCCGCCGGCG CCCCTCTGAC CGTCGAGCGC
GACCGCGACA AGAACCCCGT CGTGGCCCTG CGCGAGATCG GCGACGAGAC CATCACGGCG
GAGGATCTCA AGGAGCAGCT CATCCACTCG ATGCAGAAAT ACGTCGAGGT GGACGAGCCG
GAGGCCGAGA CCGTGCCGCT CCTCTCCAGC TCTCCCGCTG CCGCGGCGGT CGCGCCCCAG
TCGTCCTCCG ACGATAAGGA CGTGCAGTTC GACCGCATGA GCGAGGAAGA CCTTCTGCGC
GGCCTGGAGA ACCTGGCCCC GCCGACCGAG ACGGACGACG AGGGCGAGTA A
 
Protein sequence
MARVTVEDCI EKVENRFELV LLASHRARLL AAGAPLTVER DRDKNPVVAL REIGDETITA 
EDLKEQLIHS MQKYVEVDEP EAETVPLLSS SPAAAAVAPQ SSSDDKDVQF DRMSEEDLLR
GLENLAPPTE TDDEGE