| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3288 |
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| Symbol | |
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| ID | 6311099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3516526 |
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| End bp | 3517653 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642652011 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001925974 |
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| Protein GI | 188582529 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.272841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTT TCGAACCACT TGCCCTGATC GACGCCTGCT ACGCGGCGGC CCTCGATCCC
GCGGCGTGGC CCGACGCGCT CGACGGGCTC GCCGACGCGG TCGGCGCCCG GGGCGCGGTG
ATCGTCTCTC ATGATCCCAA GCGCACGGCG CAGACGCTGG CCTCCGAGCG GATCGGCGAC
GTGAATCTCG ATTACGGCGT CGGCGGCTGG TGGCAGCACG ACACGCGCAT CCGCCTCGGC
CGGCAACGCG GCATCATGCG GCCGGGCACG GTCACGGTCG ACGAGATGTA TCTCACGGCC
GACGAGAAGC GCACCGATCC CTTCTTCCAG CACTTCATCG ATCGGCACCG CCTCGGCAAC
CTCTGCGCCT ATGTCGGTGC CGACCCAATG GACAGCCACA CCCTGTCGTT CAGCACCCCC
CGCGACGTGC GCAAGGGACC CTTCGAGGGG GCCGAGGTCG AGCGGATCGG GCTCATCGGC
CCGCATGTGG TCCGCGCTTT CCGCCTGACG GCACTCATGG GCGAGATGCG GCTCGAGGCG
GAGGGTCTTG CCAACGCCCT GGAGCGGATG CGGGCCGGCA TCGTCATCCT CGATCCGCGG
GGCCGGGTCC GGCTCGTCAG CCCGGCGGCG GAGGCGCTGG CCGCGGGCTA CCTCTCCCTG
CGCACCGGCG CCGAGCCGGA GGCGTTGGAG CCCGCCGAGG CCGCGCGCTT TCACCGCTTC
CTGGCCGACG CCTTGCCGAT GCGGATCGGG CCGCGGCAGG ACGTTTTCCT CCTGCGCCGC
CGGGGCGGCG GGCGCCCGCT TGCCCTCGAA GGGCTCCCCC TGCGGGGCGG CGATCCGTTT
CCCGCGGCCG TGTCCGGCCT CGGAGGCGGG ATGGTGCTGC TCCTGCGCGA CCTGATGGCG
CCGGCCACCC GCCCCATCGA GCCCTTGCTG GAACAGTTCG GGCTGACCCG GGCCGAGGCG
CGGGTCGCGG CCCTGGTCGG ACGCGGCGCG GCGCCGCGGG AGGTGGCCGA CCAGTTCGCC
ATCGGCGAGA GCACGGTACG CAGCCAGCTC AAGGCGGTCT ACGGCAAGCT CGCGATCCGC
CGCCAGAGCG AGCTGGCGGT CTTCATCACC CGCCTCGACA GCCTGTAG
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| Protein sequence | MSGFEPLALI DACYAAALDP AAWPDALDGL ADAVGARGAV IVSHDPKRTA QTLASERIGD
VNLDYGVGGW WQHDTRIRLG RQRGIMRPGT VTVDEMYLTA DEKRTDPFFQ HFIDRHRLGN
LCAYVGADPM DSHTLSFSTP RDVRKGPFEG AEVERIGLIG PHVVRAFRLT ALMGEMRLEA
EGLANALERM RAGIVILDPR GRVRLVSPAA EALAAGYLSL RTGAEPEALE PAEAARFHRF
LADALPMRIG PRQDVFLLRR RGGGRPLALE GLPLRGGDPF PAAVSGLGGG MVLLLRDLMA
PATRPIEPLL EQFGLTRAEA RVAALVGRGA APREVADQFA IGESTVRSQL KAVYGKLAIR
RQSELAVFIT RLDSL
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