Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3196 |
Symbol | |
ID | 6310595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3427416 |
End bp | 3427961 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651919 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_001925883 |
Protein GI | 188582438 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGGG AGAGCGAGGA CGAGCGGCCG GCCGAACTCG TGGAGATCGC CGGGCGCATC AAGTGGTTCG ACGTCTCGAA GGGGTTCGGC TTCATCGTGC CGGATGACGG TTCGGCGGAC GTTCTCCTGC ACATCACCTG CCTTCGCCGG GACGGGCATC AGGCCGCGAG CGAGGGCGCG CGGATCGTGG TCGAGGCGAC GCGGCGGGAG CGCGGCTGGC AGGCGTTCCG CGTGGTCTCG CTGGATCAGT CCACCGCGCT TCACCCTTCC GAACTGCCGA TGGCCCGCAC CCACGTCACC GTGACGCCGA CGAGCGGCCT GGAGGTCGCG GTGGTGAAGT GGTTCAACCG CCTGCGCGGC TTCGGCTTCC TCAGCCGGGG CGATGGCACG CCGGACATCT TCGTCCACAT GGAGACCCTG CGCCGCTACG GCATCGCCGA GCTGAAGCCG GGCGAGCAGG TGCTGGTGCG CTACGGCGAC GGCTCGAAGG GTGCTATGGC GGCGGAAGTC CGCCTCGTCG ACGGGGCGCT TCCGGCTTCC CATTGA
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Protein sequence | MERESEDERP AELVEIAGRI KWFDVSKGFG FIVPDDGSAD VLLHITCLRR DGHQAASEGA RIVVEATRRE RGWQAFRVVS LDQSTALHPS ELPMARTHVT VTPTSGLEVA VVKWFNRLRG FGFLSRGDGT PDIFVHMETL RRYGIAELKP GEQVLVRYGD GSKGAMAAEV RLVDGALPAS H
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