Gene Mpop_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3196 
Symbol 
ID6310595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3427416 
End bp3427961 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID642651919 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_001925883 
Protein GI188582438 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGG AGAGCGAGGA CGAGCGGCCG GCCGAACTCG TGGAGATCGC CGGGCGCATC 
AAGTGGTTCG ACGTCTCGAA GGGGTTCGGC TTCATCGTGC CGGATGACGG TTCGGCGGAC
GTTCTCCTGC ACATCACCTG CCTTCGCCGG GACGGGCATC AGGCCGCGAG CGAGGGCGCG
CGGATCGTGG TCGAGGCGAC GCGGCGGGAG CGCGGCTGGC AGGCGTTCCG CGTGGTCTCG
CTGGATCAGT CCACCGCGCT TCACCCTTCC GAACTGCCGA TGGCCCGCAC CCACGTCACC
GTGACGCCGA CGAGCGGCCT GGAGGTCGCG GTGGTGAAGT GGTTCAACCG CCTGCGCGGC
TTCGGCTTCC TCAGCCGGGG CGATGGCACG CCGGACATCT TCGTCCACAT GGAGACCCTG
CGCCGCTACG GCATCGCCGA GCTGAAGCCG GGCGAGCAGG TGCTGGTGCG CTACGGCGAC
GGCTCGAAGG GTGCTATGGC GGCGGAAGTC CGCCTCGTCG ACGGGGCGCT TCCGGCTTCC
CATTGA
 
Protein sequence
MERESEDERP AELVEIAGRI KWFDVSKGFG FIVPDDGSAD VLLHITCLRR DGHQAASEGA 
RIVVEATRRE RGWQAFRVVS LDQSTALHPS ELPMARTHVT VTPTSGLEVA VVKWFNRLRG
FGFLSRGDGT PDIFVHMETL RRYGIAELKP GEQVLVRYGD GSKGAMAAEV RLVDGALPAS
H