Gene Mpop_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3163 
Symbol 
ID6310734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3397787 
End bp3398206 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content64% 
IMG OID642651886 
ProductPilT protein domain protein 
Protein accessionYP_001925850 
Protein GI188582405 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.732092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCC TCGACACCTG CGTCGTGTCC GAGTTGCGGA AGGTCCGCTC CGGCCGGGCC 
GATCCCGGTG TCGCCGCTTT CGAGAAGACG GTCGATGCCA GCGCGCTGTT CCTGTCAGCC
GTGACGATCT TGGAACTGGA ACTCGGCATC CTTGCGCTTG AGCGAAAGGA TGCTGCCCAA
AGCTCGGTGC TTCGCGCTTG GCTGGAAAAG AACGTTCTGC CGGAGTTTTC CAGCCGGACG
CTGCCGGTCG ATGTCGCCGT CGCTCGGCGG TGCGCCCGGT TGCACGTTCC CGACCGGCGA
AGCGAGCGCG ATGCGTTCAT TGCCGCGACA GCACTCGTGC ACGGGATGTC GGTCGTGACC
CGGAACGTTG CCGATTTCGA GCCGACCGGT GTCGCGATCA TCAATCCCTG GGCGGTATGA
 
Protein sequence
MYVLDTCVVS ELRKVRSGRA DPGVAAFEKT VDASALFLSA VTILELELGI LALERKDAAQ 
SSVLRAWLEK NVLPEFSSRT LPVDVAVARR CARLHVPDRR SERDAFIAAT ALVHGMSVVT
RNVADFEPTG VAIINPWAV