Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3134 |
Symbol | lpxC |
ID | 6310871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3366335 |
End bp | 3367276 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651857 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001925821 |
Protein GI | 188582376 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.196388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACGA ACCAACAGAC AACGCTCAAA ACGTCCGTGA CCCTCACCGG AATCGGAGTC CACTCCGGAA ACCCGGCGGA GATCACGATC CACCCCGCCA AAGCCAACCA CGGTATCGCC TTCCTCCGAA CGGGCACGAC CACCGGCAAC GACCGGCTCA TCAAGGCCCA CTTCGCCTGC GTCTCCGCCA CCGAGCTGTG CACCGTCATC GGTGATGTCG AGACCGGCGC CGTCGCCACC ATCGAGCACC TGATGTCGGC CCTCTACGGG CTGGGCGTCG ACAACGCGCT GATCGAGATC GACGGCCCCG AGATGCCGAT CCTCGACGGC AGCGCCCGCC CCTTCGTCAC CGCCATCGAC AGCGTCGGCC TCACCACCTG CGGTGCGCCG CGCCGCTGGA TCAAGGTGCT CCAGCCCGTC CGCATCGAGG CCGGCCGCGC CTTCGCCGAA CTCCGCCCGC TCGACTGCGG CTTCCGCCTC GACGTGGAGA TCGACTTCGA ATCCCCGGTG ATCGGCCGCT CGCGCAAGGC GATGGACCTG ACCCCGGCTG CCTACCGCCG CGAGATCGCC CCCGCCCGCA CCTTCGGCAT GATGAAGGAC GTGGAGCGCT ACTGGAAGGC GGGGTTCGCG CTCGGCGCCT CCCTCGACAA CACGGTCGCC GTCGGCGAGA CCGCCGTGGT CAACCCGGAA GGCCTGCGCT TCGCGGACGA GTTCGTCCGC CACAAGTTCC TCGACGCGGT CGGCGACCTC GCGCTGGCCG GCCTGCCGAT CCAGGGCGCC TACCGCTCCT ATTGCGGCGG CCACCGTATG AATGTCGGCA TCCTCGAAGC CCTGTTCGCC GACCGCGCGA ACTTCGCCAT CGTCGAGGGT CCGGGCGCGC GCCGCGAGCC GGCCCGCGCC GAGTTCGGCC TCGGCATCGC CGCCTTCGCC GCGGAACTGT AG
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Protein sequence | MRTNQQTTLK TSVTLTGIGV HSGNPAEITI HPAKANHGIA FLRTGTTTGN DRLIKAHFAC VSATELCTVI GDVETGAVAT IEHLMSALYG LGVDNALIEI DGPEMPILDG SARPFVTAID SVGLTTCGAP RRWIKVLQPV RIEAGRAFAE LRPLDCGFRL DVEIDFESPV IGRSRKAMDL TPAAYRREIA PARTFGMMKD VERYWKAGFA LGASLDNTVA VGETAVVNPE GLRFADEFVR HKFLDAVGDL ALAGLPIQGA YRSYCGGHRM NVGILEALFA DRANFAIVEG PGARREPARA EFGLGIAAFA AEL
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