| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3084 |
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| Symbol | |
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| ID | 6311018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3308313 |
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| End bp | 3310298 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642651810 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001925774 |
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| Protein GI | 188582329 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.847978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGA CGAAAATCCT CTGGGGCCAA ATCCTGACCG TCTCCGCGAT CGTGCTCGCC
ACGACCTGGG GCGCAACGGA ATGGGTGGCC TGGCGGCTCG CCTTCCAGCC GGAGCTTGGG
GCACCGTGGT TCCAGCTGTT CGGTTTTCCC TTCTATTTGC CGCCCGCCTT CTTCTGGTGG
TGGTATGGCT TTGATGCCTA TGCGCCGTCG ATCTTCGTCG AGGGCGCGTG GATCGCGGCG
TCAGGCGGAT TCATCTCGGT GGCCGTCGCC ATCGGCATGT CGGTCTGGCG CGCCCGCGAG
GCCAAGAAGG TCGAGACCTA CGGCTCCGCT CGCTGGGCCG AGAAGGAAGA AGTGAAGGCG
GCGGGACTTC TCAATCCCGA TGGCGTCGTG CTCGGCCGCT ACGACCATGA TTATCTTCGC
CATGATGGAC CGGAGCATGT GCTGTGCTTC GCGCCGACCC GTTCAGGCAA GGGCGTTGGC
CTGGTCGTCC CCTCGCTGCT GACCTGGCCT GGGTCGGCGA TCGTCCACGA CATCAAGGGC
GAGAACTGGC AACTCACCGC CGGCTTTCGC GCACGACATG GCCGCGTGCT CCTGTTCGAT
CCGACCAACC CGAAGTCCTC GGCCTACAAT CCGCTGCTGG AGGTCCGCCG CGGCGAATGG
GAGGTGCGCG ACGTCCAGAA CATCGCGGAC ATCCTCGTCG ATCCCGAAGG CTCGCTCGAG
AAGCGCAACC ATTGGGAAAA AACCAGCCAC GCGCTGCTGG TCGGTGCAAT CCTCCATGTC
CTCTACGCTG AAGAGGAAAA GACTCTCGCT GGCGTCGCTG CCTTCCTCTC CGATCCGAAG
CGGCCGATCG AGTCGACGCT CGCCGCGATG ATGAAGACGG CGCATCTCGG TGAAGCCGGG
CCGCACCCCG TCATCGCCAG CGCCGCGCGC GAGCTGCTCA ACAAATCCGA CAACGAGCGA
TCGGGCGTGC TGTCGACCGC CATGTCCTTC CTCGGCCTCT ATCGCGATCC TGTCGTGGCA
GAGGTGACGC GCCGCTGCGA CTGGCGGATC ACCGACATCG TGACGGCTAG GCATCCGACC
ACGCTCTACC TCGTCGTCCC GCCGTCCGAC ATCAACCGCA CCAAGCCGCT CATCCGCCTG
ATCCTCAATC AGGTCGGCCG CCGCCTGACC GAGGATCTCC AGGCCAAGGC CGGTCGCCAT
CGGCTGCTGC TGATGCTCGA CGAATTTCCG GCGCTGGGCC GGCTCGATTT CTTCGAGTCC
GCGCTGGCCT TCATGGCGGG CTATGGCCTG AAGAGTTTCC TGATCGCGCA AAGCCTCAAT
CAGATCGAGA AAGCCTATGG CGCGAACAAC TCGATCCTCG ACAACTGCCA TGTGCGGGTG
AGCTTCGCGA CCAACGACGA GCGCACGGCC AAGCGCGTAT CGGACGCGCT CGGCACCGCG
ACCGAGATGA AGGCGATGCG AAACTATGCG GGGCACCGGC TGTCGCCGTG GCTCGGACAT
CTGATGGTGT CGCGCTCAGA AACGGCCCGC CAGCTGCTCA CCCCCGGCGA GATCATGCAG
CTTCCGCCGA GCGATGAGAT CGTCATGGTC GCGGGCACGC CGCCGATCCG GGCGAAAAAG
GCCCGCTACT ACGAGGACGC GCGTTTCAAG GAGCGCATCC TGCCGCCGCC AGCACTGGTC
GTCCCGAAAC AGGGGCGTCC CGACGATTGG ACCGCGCTGC CGCTCCCACT TCGACCTGAG
ACGGCAGAGC CGGGATCAGC GGCGGAGGCC AGCGATGAAG ATCCAACCGC TTCCGAACGT
CGCCAGCAAC CCGAACTCAA TCGCTTGGAG CCTGTCGAGA AGAAGGCTCC GGTCGAGAAC
GAGTTCGAGA TCGGCCTTGC CGACGAGGCC GAAGATGACC CGGTCCGCAA CAGCCGGATG
AACCGGCTGA TGCAGGGCGT TGCCCGTCAG GTCTCGCTCG ATCCGGGCGA TGGCATGGAA
CTGTGA
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| Protein sequence | MSATKILWGQ ILTVSAIVLA TTWGATEWVA WRLAFQPELG APWFQLFGFP FYLPPAFFWW
WYGFDAYAPS IFVEGAWIAA SGGFISVAVA IGMSVWRARE AKKVETYGSA RWAEKEEVKA
AGLLNPDGVV LGRYDHDYLR HDGPEHVLCF APTRSGKGVG LVVPSLLTWP GSAIVHDIKG
ENWQLTAGFR ARHGRVLLFD PTNPKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE
KRNHWEKTSH ALLVGAILHV LYAEEEKTLA GVAAFLSDPK RPIESTLAAM MKTAHLGEAG
PHPVIASAAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA EVTRRCDWRI TDIVTARHPT
TLYLVVPPSD INRTKPLIRL ILNQVGRRLT EDLQAKAGRH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGL KSFLIAQSLN QIEKAYGANN SILDNCHVRV SFATNDERTA KRVSDALGTA
TEMKAMRNYA GHRLSPWLGH LMVSRSETAR QLLTPGEIMQ LPPSDEIVMV AGTPPIRAKK
ARYYEDARFK ERILPPPALV VPKQGRPDDW TALPLPLRPE TAEPGSAAEA SDEDPTASER
RQQPELNRLE PVEKKAPVEN EFEIGLADEA EDDPVRNSRM NRLMQGVARQ VSLDPGDGME
L
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