| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2836 |
|---|
| Symbol | |
|---|
| ID | 6310189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3052828 |
|---|
| End bp | 3055185 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642651560 |
|---|
| Product | 1,4-alpha-glucan branching enzyme |
|---|
| Protein accession | YP_001925526 |
|---|
| Protein GI | 188582081 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.573096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.13472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTC TGGACGAGAA GGCCGCGGCT CGAAACGAGG GGCAGGCGGC CGCCAACGTC
CCGAACAGGT CAGGCTCGAC CGAGGCGCAC CGCGCGCCCC GGCCGGCGGA TTCGCTGGGC
GGCGATGGTG GAGCGCCCCG CGTGGGCCGC CCCACGTGCC AACCCCGCGA CGGCCACCTC
CATCCCGATG CGGTCGCCGC CATCATGGCG GCCGACCATG GCGACGCCTT CGGCGTGCTG
GGACCGCATC AGGTCGCGCC CGGCACCTGG GAGGTCCGCG CGGTCCTGCC CGAGGCCAAG
GCGGCCCGCC TGCTCACCGG CGGGCAGACC GTCCCGTTCG AGCGTGTCCA CCCGGATGGG
TTCTACGTCG CGAGCGTGAA GAGCGAGGGG CGTCCCCTCT ACGAGATCGA GGTCGAGGCC
TGGGACGGCA GCAGCACCCG CCGCCACGAT CCCTACGGGT TCGGCCCCTC CCTCGAACAG
AGCGAGATCG AGGGCCTGCG CCAGATCGGC AGCAATCTCG TCTACCGCGT CCTCGGCGCC
CATGCCGGCG AACTCGACGG CATCCCCGGC TTCCGCTTCG CGGTCTGGGC GCCGAACGCC
CGCCGTGTCA GCGTGGTCGG CGACTTCAAC GACTGGGACG GCCGGCGCCA CCCGATGCGG
CTGTGGCTGA ACGGCGGCGT CTGGGAACTC TTCGTGCCGG GGCTCAAGGC CGGGCAGAAC
TACAAGTTCG AGATCCGCGG TCCCGATGGC GCGCTGCTGC CGCTCAAGGC CGATCCGGTC
GCGTTCCGTG GCCAGCACCC GCCGCAGACG GCGTCCGTAC TTCAGGGCCT CAACGAGCCG
GAATGGCACG ATAACGCCTG GATGGACAGC CGCGGCGAGA AGGATCCCCG CCACGCCGCC
ATGTCGGTCT ACGAGGTGCA TCTCGGCTCG TGGGCTCGGG TGCCGGGCGA AGGCAACCGC
TATCTCACCT ACAAGGAATT GTCCGATCGC CTGATCCCCT ACGTCAAGGA ACTCGGCTTC
ACCCATATCG AGCTTCTGCC GATCACCGAG TACCCGTTCG ACGGCTCCTG GGGTTATCAG
CCGGTCTCGC TGTTCGCCCC GACGAGCCGT TTCGGCACGC CCGACGACTT CGTCGCCTTC
GTCAACGCCG CCCACGAGGC CGGAATCGGC GTGCTGCTCG ATTGGGTGCC GGGGCACTTC
CCCCTCGATG CGCACGGGCT CGGACTGTTC GACGGCACGC ATCTCTACGA GCACGCCGAT
CCGCGCCAGG GCTTCCACCA GGATTGGGGA ACCTACATCT ACAATTTCGG CCGCACGGAA
GTGTCGGCCT TCCTCACCGC CAACGCCCGG TTCTGGCTGG AGCACTATCA TCTCGACGGC
CTGCGCGTGG ATGCGGTGGC CTCGATGCTC TACCTCGACT ATTCGCGCCG GGCGGGCGAG
TGGATCCCGA ACCAGTACGG CGGCAACGAG AATCTCGACG CCATCAACTT CCTGCGCAAG
ACCAACGAGG CGACCTACAG CCACGCGCCG GGCACCATCA CGGTGGCGGA GGAATCGACC
TCATGGCCGG GCGTCTCGCA CCCGACCTAT ACCGGCGGCC TCGGCTTCGG CTTCAAGTGG
AATATGGGGT GGATGCACGA CACCCTGAAA TACATGTCGG AGGATCCGAT CCACCGGCGC
TACCACCACC ACAACCTGAC CTTCGGCCTG CTCTACGCCT TCTCGGAAAA TTTCGTCCTG
CCGCTCTCCC ACGACGAAGT CGTGCACGGG AAGGGCTCGC TGCTCGGCAA GATGCCGGGC
GACCGCTGGC AGAAATTCGC GAACTTGCGC GCCTATTTCG GCTTCATGTG GGGCCATCCC
GGCAAGAAGC TGCTCTTCAT GGGCGGCGAG TTCGGCCAGG AGCGCGAGTG GAACCACAAC
CAGTCCCTCG ACTGGCACCT GCTCGACGAT CCGCTGCATG GCGGCGTCAA GGATCTGATC
CGCGACCTCA ACCACGTCTA CACCTCGACC CCGGCGCTCT ACACGCGGGA CGTGGAACCG
GGCGGCTTCC AGTGGCTGGT GGCGGACGAT TCCGACAACT CGGTCATCGC CTGGGCGCGC
AAGGGCAAGG CGGAGGGCGA AGTCGCCATC GTCGTCTCGA ACTTCACGCC GGTGCCGCGG
GAAGGCTATC GCGTCGGCGT GCCGACGGCC GGCTATTACC GCGAGGCGAT CAACTCCGAC
GCCGAGCGCT ACGGCGGCTC GAACGTCGGC AATATGGGCG GCGTTCACAG CCAATCTGAG
CAGAGTCACG GCCAGCCGCA CTCTCTGAGC CTGACCCTGC CGCCGCTATC GACCCTGATC
CTGATCCGCG AAGGCTGA
|
|---|
| Protein sequence | MTALDEKAAA RNEGQAAANV PNRSGSTEAH RAPRPADSLG GDGGAPRVGR PTCQPRDGHL
HPDAVAAIMA ADHGDAFGVL GPHQVAPGTW EVRAVLPEAK AARLLTGGQT VPFERVHPDG
FYVASVKSEG RPLYEIEVEA WDGSSTRRHD PYGFGPSLEQ SEIEGLRQIG SNLVYRVLGA
HAGELDGIPG FRFAVWAPNA RRVSVVGDFN DWDGRRHPMR LWLNGGVWEL FVPGLKAGQN
YKFEIRGPDG ALLPLKADPV AFRGQHPPQT ASVLQGLNEP EWHDNAWMDS RGEKDPRHAA
MSVYEVHLGS WARVPGEGNR YLTYKELSDR LIPYVKELGF THIELLPITE YPFDGSWGYQ
PVSLFAPTSR FGTPDDFVAF VNAAHEAGIG VLLDWVPGHF PLDAHGLGLF DGTHLYEHAD
PRQGFHQDWG TYIYNFGRTE VSAFLTANAR FWLEHYHLDG LRVDAVASML YLDYSRRAGE
WIPNQYGGNE NLDAINFLRK TNEATYSHAP GTITVAEEST SWPGVSHPTY TGGLGFGFKW
NMGWMHDTLK YMSEDPIHRR YHHHNLTFGL LYAFSENFVL PLSHDEVVHG KGSLLGKMPG
DRWQKFANLR AYFGFMWGHP GKKLLFMGGE FGQEREWNHN QSLDWHLLDD PLHGGVKDLI
RDLNHVYTST PALYTRDVEP GGFQWLVADD SDNSVIAWAR KGKAEGEVAI VVSNFTPVPR
EGYRVGVPTA GYYREAINSD AERYGGSNVG NMGGVHSQSE QSHGQPHSLS LTLPPLSTLI
LIREG
|
|---|
| |