Gene Mpop_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2496 
Symbol 
ID6309975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2713814 
End bp2715499 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID642651224 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_001925192 
Protein GI188581747 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.342861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCC TCGTCCCACT CCTCGGCGTC CTCCTCCTCG GCGCCACCAC GGCGATCGCC 
GCCGGTCCCG ATATGGGCGC CGTGCAGAAG CAGGCCACGA ACTGGCCCGC CATCTTCATG
TTCCTGTTCT TCGTGCTGTT CACCCTCGGG ATCACCTACC GGGCGGCGAA GGGCTCGAAG
TCGGCCTCCG ACTTCTACGC GGCCGGCGGC GGCATCTCGG CGCGCACCAA CTCGCTGGCG
ATCGCCGGCG ACTACATGTC GGCGGCCTCC TTCCTCGGCA TCTCGGGGCT CGTCTATTCC
TCCGGCTTCG ACGGCCTGAT CTACTCGACG GGCTTCCTCG TCGGATGGCC GATCGTGCTG
TTCCTGATCG CCGAGCGGCT GCGCAATCTC GGCAAGTTCA CCTTCGCCGA CGTCGCGAGC
TTCCGCCTCG ACCAGACCTC GATCCGCATC ATCTCGGCCA CCGGCACCCT CGTCGTGGTG
GCGTTCTACC TGATCGCGCA GATGGTCGGC GCGGGTAAGC TGATCCAGCT CCTGTTCGGC
CTCGACTACC TCTATGCGGT GGTGATCGTC GGCGCGCTGA TGATCATCTA TGTCGCCTTC
GGCGGCATGA AGGCGACGAC CTGGGTGCAG GTCATCAAGG CCTGCCTGCT GCTGGGGGGC
GCGACATTCA TGGCCGGCGC CGTGCTCTAC CTCTACGACT TCAGCCCGGA GAAGCTGTTC
GCGACCGCGG TGCAGACCCA TCCGAAGGGC GACGCCATCA TGGCGCCCGG CGGCCTCGTC
TCGAACCCGA TCGACTCGAT CTCGCTCGGC GTCGGCCTGA TGTTCGGCAC CGCCGGCCTG
CCCCACATCC TGATGCGCTT CTTCACGGTG TCGGACGCCC AGGCGGCCCG CAAGTCGGTG
TTCTACGCCA CCGGCCTGAT CGGCTACTTC TACATCCTCA CCTTCATCAT CGGCTTCGGC
GGCATCGCCC TGCTGATGTC CGATCCGAGC TACTTCAAGC TCGGTGCCGA CGGCACGACC
TACGACAAGA TCAAGGACAT GGTCGGCGGC ACCAACATGG TCGCCGTGAA CCTCGCCAAC
GCGGTGGGTG GGCCGTACTT CCTCGGCTTC ATCTCGGCGG TGGCCTTCGC GACCATCCTC
GCGGTGGTGG CGGGCCTGAC GCTGGCCGGC GCCTCGGCGA TCAGCCACGA TCTCTACGCT
CAGGTCTTCG CCCGCGGCCG CACCACCGAG AAGGCGGAGG TCAACCTCTC CAAGCTCTCC
GCCGTCGGCA TCGGCATCGT GGCGATCTAT CTCGGCTACG TGTTCGAGAA CCAGAACGTC
GCCTTCATGG TCGGCCTCGC CTTCTCGGTG GCAGCGAGCT GCAACTTCCC GGTCCTGACC
ATGTCGATCC TCTGGCGCGG CACCACGACC TGGGGTGCGC TGGCCGGCGG CCTCGTCGGA
CTCGTCGCGG CCGTCGTCAT GGTGGTGCTC TCCGACGCGG TCTGGGTGAA GACCTTCGGC
CATCCGGTGG CGCTGTTCCC CTACGCCAAC CCGGCTCTGT TCTCGATGCC GCTGGCCTTC
GTGACGATCT GGGCGGTCTC GTCGATGGAC CGGACCCGCC GGGCCAACCG CGAGCGCGCC
GCCTTCGATG CGCAGTTCGT GCGCTCGGAG ACGGGCATCG GAGCCTCGGG GGCGCACGCC
CACTGA
 
Protein sequence
MIRLVPLLGV LLLGATTAIA AGPDMGAVQK QATNWPAIFM FLFFVLFTLG ITYRAAKGSK 
SASDFYAAGG GISARTNSLA IAGDYMSAAS FLGISGLVYS SGFDGLIYST GFLVGWPIVL
FLIAERLRNL GKFTFADVAS FRLDQTSIRI ISATGTLVVV AFYLIAQMVG AGKLIQLLFG
LDYLYAVVIV GALMIIYVAF GGMKATTWVQ VIKACLLLGG ATFMAGAVLY LYDFSPEKLF
ATAVQTHPKG DAIMAPGGLV SNPIDSISLG VGLMFGTAGL PHILMRFFTV SDAQAARKSV
FYATGLIGYF YILTFIIGFG GIALLMSDPS YFKLGADGTT YDKIKDMVGG TNMVAVNLAN
AVGGPYFLGF ISAVAFATIL AVVAGLTLAG ASAISHDLYA QVFARGRTTE KAEVNLSKLS
AVGIGIVAIY LGYVFENQNV AFMVGLAFSV AASCNFPVLT MSILWRGTTT WGALAGGLVG
LVAAVVMVVL SDAVWVKTFG HPVALFPYAN PALFSMPLAF VTIWAVSSMD RTRRANRERA
AFDAQFVRSE TGIGASGAHA H