Gene Mpop_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2372 
SymbolclpX 
ID6309328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2581649 
End bp2582920 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content66% 
IMG OID642651099 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_001925069 
Protein GI188581624 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CAGGCGGCAA CGACTCGAAG AGCACGCTGT ACTGCTCGTT CTGCGGCAAG 
AGCCAGCACG AGGTTCGCAA GCTGATTGCG GGCCCGACGG TGTTCATCTG CGACGAGTGC
GTCGAGCTGT GCATGGACAT CATCCGCGAG GAATCGAAGT CCTCGCTGGT GAAGTCCCGC
GACGGGGTGC CGACCCCGAA GGAGATCCGG CGGGTCCTCG ACGACTACGT CATCGGGCAG
GACTTCGCCA AGAAGGTTCT CTCGGTGGCC GTGCACAACC ACTACAAGCG GCTCGCCCAC
GCGACGAAGC ACAACGACGT CGAGCTCGCC AAGTCCAACA TCATGCTGAT CGGGCCGACG
GGCTCGGGCA AGACGCTGCT CGCGCAGACG CTCGCCCGCA TCCTCGACGT GCCCTTCACC
ATGGCGGACG CGACGACGCT GACCGAGGCC GGCTATGTCG GCGAGGACGT CGAGAACATC
ATCCTCAAGC TGCTCCAGGC CTCCGACTAC AACGTCGAGC GGGCGCAGCG CGGCATCGTC
TACATCGACG AGATCGACAA GATCTCCCGC AAGTCGGACA ACCCCTCGAT CACCCGCGAC
GTCTCGGGCG AGGGCGTGCA GCAGGCGCTC CTGAAGATCA TGGAGGGCAC CGTCGCCTCC
GTGCCTCCGC AGGGCGGCCG CAAGCACCCG CAGCAGGAGT TCCTGCAGGT CGACACCACG
AACATCCTGT TCATCTGCGG CGGCGCCTTC GCCGGGCTGG AGCGCATCAT CTCCCAGCGC
GGCAAGGGCA CCTCGATCGG CTTCGGCGCC AGCGTGCAGG CGCCGGACGA CCGCCGCACC
GGTGAAGTCT TCCGCTCGGT GGAGCCCGAG GATCTGCTGA AGTTCGGCCT CATCCCCGAA
TTCGTCGGCC GTCTTCCGGT TCTCGCCACG CTGGAGGATC TCGACGAGGA AGCCCTCAAG
AAGATCCTGC AGGAGCCGAA GAACGCCCTG GTCAAGCAGT ACCAGCGGCT GTTCGAGATG
GAGAACGTCG AGCTGACGTT CCAGGACGAG GCGCTCGGCC TCGTCGCCCG CAAGGCCATC
GAGCGCAAGA CCGGCGCCCG CGGCCTGCGG TCGATCCTGG AGACCATCCT CCTCGACACG
ATGTACGACC TGCCGGGCCT CGACTCGGTC GAGCAGGTGG TCATCGGACC CGAGGTGGTG
GACGGCAAGT CGAAGCCGCT CTTCATCCAC GGCGACCGCA ACAAGGACGC ACCGGCCAGC
GTCAGCGCCT GA
 
Protein sequence
MSKTGGNDSK STLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ESKSSLVKSR 
DGVPTPKEIR RVLDDYVIGQ DFAKKVLSVA VHNHYKRLAH ATKHNDVELA KSNIMLIGPT
GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQASDY NVERAQRGIV
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT
NILFICGGAF AGLERIISQR GKGTSIGFGA SVQAPDDRRT GEVFRSVEPE DLLKFGLIPE
FVGRLPVLAT LEDLDEEALK KILQEPKNAL VKQYQRLFEM ENVELTFQDE ALGLVARKAI
ERKTGARGLR SILETILLDT MYDLPGLDSV EQVVIGPEVV DGKSKPLFIH GDRNKDAPAS
VSA