| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2302 |
|---|
| Symbol | |
|---|
| ID | 6313186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2458042 |
|---|
| End bp | 2460666 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642651027 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_001924999 |
|---|
| Protein GI | 188581554 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.409555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0500216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG AAAAGTACAC CGAGCGCGCC CGGGGCTTCG TCCAGGCCGC GCAGAATCTC
GCCGTCCGCG AGGGCAACCC GCAGCTCGCG CCCGGTCATC TTCTGAAAGT CCTGCTCGAC
GATCCCGAGG GGCTCTGCGC CGGTCTCATC GACCGGGCCG GCGGCCAGTC GCGGGTCGCG
CATGCGCAGG TCGAGCAGTG GCTCGCCAAG CAGCCGAAGG TCTCGGGCAA CGCCGCGCAG
CCGCAGGCGA CGCGCGAACT CGTACGTCTG TTCGACACTG CGGAGCAGGC CGCCGAAAAG
GCGGGCGATT CCTACGTCAC CGTCGAGCGC CTGCTGCTCG CCTTCGCCGT CGAGAAGGAT
TCGGAGGGCG GTCGCATCCT GACCGCGGCG GGCGTCACCG CGGCCTCGCT CAACGCGGCG
ATCAATGCGC TGCGCAAAGG CCGCACCGCC GACAACGCGT CGGCCGAGAA CGCCTACGAC
GCGCTGAAGA AATATGCCCG CGACCTCACC GAGGCGGCCC GCGAGGGCAA GCTCGATCCG
GTGATCGGCC GCGACGAGGA GATCCGACGC ACGATCCAGG TGCTGTCGCG GCGCACCAAG
AACAACCCGG TGCTGATCGG CGAGCCCGGC GTGGGCAAGA CCGCCATCGT CGAGGGCCTG
GCCCTGCGCA TCGTCAACGG CGACGTGCCG GAATCCCTCA AGGAGAAGAA CCTCCTGGCG
CTCGACATGG GCGCGCTGAT CGCCGGCGCG AAGTATCGCG GCGAGTTCGA GGAGCGGCTG
AAGGGCGTGC TCTCCGAGGT GACCGCGGCG GAAGGCCAGA TCATCCTGTT CATCGACGAG
ATGCACACGC TGGTCGGCGC CGGCAAGGCG GATGGCGCCA TGGACGCCTC GAACCTCCTG
AAGCCCGCGC TCGCCCGCGG CGAGCTGCAC TGCGTCGGCG CGACCACGCT CGACGAGTAC
CGCAAGCATG TCGAGAAGGA TGCGGCGCTC GCCCGCCGCT TCCAGCCCGT CTTCGTGTCC
GAGCCCACCG TCGAGGACAC GGTCTCGATC CTGCGCGGCA TCAAGGAGAA GTACGAGCAG
CACCACGGCG TGCGCATCCA GGACAGCGCG CTCGTCGCGG CGGCGACCCT GTCGAACCGC
TACATCACCG ACCGCTTCCT GCCCGACAAG GCGATCGACC TCGTCGACGA GGCGGGCTCG
CGCCTGCGCA TGCAGGTCGA TTCGAAGCCC GAGGAACTCG ACAACGTCGA CCGCGAGATC
GTGCGGCTGA AGATCGAGGG CGAGGCGCTG AAGAAGGAGA CGGATTCCGC CTCCCGCGAC
CGGCTCCAGC GCCTGGAAAA GGAGCTGGCC GATCTCGAGG AGCAGTCCGC CACCATCACG
GCCCGCTGGA AGGCCGAGAA GGACAAGCTG GGTGCGGCCG CCGAGCTGAA GAAGAAGCTC
GACGAGGCGC GCAACGAACT CGCCTCGGCG CAGCGCCAGG GCCAGTATCA GCGCGCGGGC
GAACTCGCCT ACGGCGTCAT TCCGGGCCTG GAAAAGCAGC TCGCCGAGAT CGAGGCTGCG
GCCGAGAGCG CGGTGGCCCG CGACGGCATG GTCGAGGAGG CGGTGACGCC GGCCCATATC
GCGGGCGTCG TCTCCCGCTG GACCGGCGTG CCGGTGGACA AGATGCTGGA GGGTGAGCGC
GAGAAGCTGC TCGCGATGGA GGAGGCGCTC GGAAAGCGCG TCGTCGGCCA GCGCGAGGCG
GTGGAGGCGG TCTCGACCGC GGTCCGCCGG GCACGGGCCG GCCTGCAGGA CCCGAACCGG
CCGATCGGCT CGTTCATGTT CCTCGGGCCG ACGGGCGTCG GCAAGACCGA GCTGACCAAG
GCGCTCGCCG GCTTCCTGTT CGACGACGAC ACGGCGCTCG TTCGCATCGA CATGTCCGAG
TACATGGAGA AGCACGCGGT GGCCCGTCTC ATCGGCGCGC CTCCAGGCTA TGTCGGCTAC
GAGGAGGGCG GGGCGCTGAC CGAGGCGGTG CGGCGCCGGC CCTATCAAGT CGTGTTGTTC
GACGAGGTCG AGAAGGCGCA TCCGGACGTG TTCAACGTCC TGCTGCAGGT GCTCGACGAC
GGGCGGCTGA CGGACGGGCA GGGGCGGACG GTCGATTTCC GCAACACGCT GCTCATCATG
ACCTCGAACC TGGGCGCCGA ATATCTGGTG AACCAGCCGG CTGGCCAGGA CACCGATGCG
GTGCGCGACG AGGTGATGGG CGTGGTGCGG AGCCACTTCC GGCCCGAGTT CCTGAACCGG
GTCGACGAGA TCATCCTGTT CCACCGCCTC GCGCGGTCGG AGATGGGCGC GATCGTTGAC
ATCCAGCTCG GGCGTCTCGC CAAGCTCCTG GAAGATCGCA AGATCTCCCT CGACGTGGAC
GACGAGGCCC GCACCTGGCT CGCCGACAAG GGCTACGACC CGGCCTACGG GGCGCGGCCG
CTGAAGCGGG TGATCCAGAA GAACGTGCAG GATCCCCTCG CCGAGGCGAT CCTCTCCGGG
GTGATCCACG ACGGCGAGAC GGTGCCGGTT CGGGTCGGCC CCGCGGGGCT GATGATCGGC
GACGTTGCCG CCGAGCGCCG GCCGGCGGGG GTGCTGCTGA ACTGA
|
|---|
| Protein sequence | MNFEKYTERA RGFVQAAQNL AVREGNPQLA PGHLLKVLLD DPEGLCAGLI DRAGGQSRVA
HAQVEQWLAK QPKVSGNAAQ PQATRELVRL FDTAEQAAEK AGDSYVTVER LLLAFAVEKD
SEGGRILTAA GVTAASLNAA INALRKGRTA DNASAENAYD ALKKYARDLT EAAREGKLDP
VIGRDEEIRR TIQVLSRRTK NNPVLIGEPG VGKTAIVEGL ALRIVNGDVP ESLKEKNLLA
LDMGALIAGA KYRGEFEERL KGVLSEVTAA EGQIILFIDE MHTLVGAGKA DGAMDASNLL
KPALARGELH CVGATTLDEY RKHVEKDAAL ARRFQPVFVS EPTVEDTVSI LRGIKEKYEQ
HHGVRIQDSA LVAAATLSNR YITDRFLPDK AIDLVDEAGS RLRMQVDSKP EELDNVDREI
VRLKIEGEAL KKETDSASRD RLQRLEKELA DLEEQSATIT ARWKAEKDKL GAAAELKKKL
DEARNELASA QRQGQYQRAG ELAYGVIPGL EKQLAEIEAA AESAVARDGM VEEAVTPAHI
AGVVSRWTGV PVDKMLEGER EKLLAMEEAL GKRVVGQREA VEAVSTAVRR ARAGLQDPNR
PIGSFMFLGP TGVGKTELTK ALAGFLFDDD TALVRIDMSE YMEKHAVARL IGAPPGYVGY
EEGGALTEAV RRRPYQVVLF DEVEKAHPDV FNVLLQVLDD GRLTDGQGRT VDFRNTLLIM
TSNLGAEYLV NQPAGQDTDA VRDEVMGVVR SHFRPEFLNR VDEIILFHRL ARSEMGAIVD
IQLGRLAKLL EDRKISLDVD DEARTWLADK GYDPAYGARP LKRVIQKNVQ DPLAEAILSG
VIHDGETVPV RVGPAGLMIG DVAAERRPAG VLLN
|
|---|
| |