Gene Mpop_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2246 
Symbol 
ID6309856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2400231 
End bp2400728 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content74% 
IMG OID642650971 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001924943 
Protein GI188581498 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.37412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.418544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCTGC TCGTCGTCGC CATCGGACGC CTGAAGAACG GGCCGGAGCG GGATCTCGCC 
GCCCGCTACC GCGAGCGCGC GGTCGCGCTC GGCAAGAGTC TCGGCGTCAC CGCCTGCGAT
CTCACCGAGA TCCCCGAATC CCGCGCCCGC CGCGCCGCCG ACCGGGTCGC CGAGGAGGCG
GCGGCGATCC TCGCCCTCGT GCCGGCGGAT GCGGCGGTGA TCGCCTGCGA CGAGCGCGGC
CGCTCGGACT GGCCGAGCGA GCGGATCGCG GAGAAGATCG GCGGCTGGCG CGATGCGGGG
CGCGGCAGCC TCGTCCTCGT CATCGGCGGG GCCGACGGCC TTCACGAGAG CGTGCGCGGG
CGCGCCGACC ATATTCTCGC CTTCGGAGCG GCGACACTGC CGCACGGTCT GGTGCGCGTG
CTCGCCCTCG AGCAGGTCTA CCGGGCGCTG ACCATTCTGG CCGGACACCC CTATCACCGG
GGCGATCCCG AGGCATGA
 
Protein sequence
MRLLVVAIGR LKNGPERDLA ARYRERAVAL GKSLGVTACD LTEIPESRAR RAADRVAEEA 
AAILALVPAD AAVIACDERG RSDWPSERIA EKIGGWRDAG RGSLVLVIGG ADGLHESVRG
RADHILAFGA ATLPHGLVRV LALEQVYRAL TILAGHPYHR GDPEA