| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2185 |
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| Symbol | |
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| ID | 6308806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 2337322 |
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| End bp | 2339655 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642650910 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001924882 |
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| Protein GI | 188581437 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.290622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCT ACAGCGACGT CGTCCTGGGC AGGCTCGGCC GCTTGGCCGA CCGCTGCGCC
CTCGTCACCA CCCGGGACGG CCGGGCCGAG CGCATCCTCT GGGGCGGCCC GGGATTCCGT
GACTGGTTCG AGGACGAGGT CCACGACCGG CCCCTCGCCG GCCTGCCCGA GGAGATCCGC
CGTCCGGTCG AGGAGATCGC CGTCAGGGCC CTGCGCAGCG GCGAGCCGGC GAGCGCGCGC
TGCGACCGCA TCACCGACGG CATCGTCACC ACCTGGGGTC TCGTCGGGGT TCCCCTCGCC
GATGGCGGCG GTACCCCCCT TCTCCTCATC CACGTGGACA GCGACGCGGT CCGCACCGAG
CTGATGCAGG CGATGTTCGG CGCGACCGGT CAGGGCCTGA TGGCGGTCGG CGCCATCCGC
GACGGCGAGG GCGCGGTCGT CGACTTCAAG ATCGTCGCCG CGAATCAGGG CGCCGCCGAG
ATCTTCGGGC GGGCGATCGC GACCCTGCAG TGGCAGCGCC TCGGCGCGCT CGTCCCGGCG
CGGCTCGGCG TGACGGGGCT CCTGGCCGGG ATTCTCGGTC GCTCCGATCG GGCGGTCTTC
GAACTCGCCT CCCCGCGCTC CGACGGGACG GTCCTGCACC TGAAGGTCGA GGCGCGGGCG
ATCGGCGACC TCATCGCCGT CGCCATGACC GATATCGGGG ACATCAAGGC GCGGGAGGCC
TCGTTCCGGT TCCTGTTCGA GAACAATCCC CTGCCGATGT GGCTCGTCGA TGGGGAGACG
GCCCGGTTCG TCGCGGTGAA CGAGGCGGCC ATCACCCATT ACGGGTTCGA CCGTGAGGCG
TTCCTGGCCC GGCGCCTGCC CGACCTGTCG GAGGCCGGCG CCCCCAGCCT CTCCCGCGAC
GGAGGCCTGC ACCGCCACCT CAGGGCCGAC GGATCGGTGA TCGAGGTGAC GCTGTTCGAG
CGCTCCCTCG CCTTCGAGGG CCGACCGGCC GTGCTCGGGG CGGCCATCGA CGTGACCGAG
CAGCGCCGCG CCGAGGCGCG CATCACCCAC ATGGCCCACC ACGACGCGCT AACGGGCCTG
CCGAACCGCG CCTTGTTCGC CGTCCGTCTC GCCGAGGCGA TCGCCGAGCA CGCCCGCACC
GGCGTCGCGG CCGCCCTGCT GTGCCTTGAC CTCGACAAGT TCAAGTTCGT CAACGACACC
CTCGGCCATC CCGCGGGCGA TGCGCTGCTC CGGCAGGTGG CGGAGCGGAT CACGGCCTGC
CTGCGCCGGG AGGATCTGGT CGCCCGGCTC GGCGGCGACG AATTCGCCGT GCTGCTGCGC
AATCCCGACG CGGCGACCGT GGACACCATC GCCGGCCGGA TCATCGAGGC GCTGTCGCGC
CCCATCCGGC TCGGCGACCG GGAGTGCCAG ATCGGGGTAA GCGTCGGTTT CGCCCGCCTG
CCCGAGCACG GAACGGAATC CGATATCCTG CTGCGCAACG CCGACCTCGC CCTGTATCGG
GCCAAGGCGG AGGGTGGCAG CGTCGCCCAT GGCTTCGAGG CGGCGATGGA CAGCTGGGCC
CGGTCCCGGC GCCGAAGGGA GACCGACCTG CACGAAGCGT TCGCCCGGGG CGAACTCGCC
CTCGCCTATC AGCCCGTCCT CGGCGTCCGC TCACGGGCGA TCCTGGGCTT CGAGGCATTG
CTGCGGTGGC AGCATTCCGT CGAGGGCGCG ATTCCCCCGT CCGACTTCGT GCCCCTGGCC
GAGGAGACCG GATTGATCGT GCCGATCGGC GCCTGGGTCC TACGGCAGGC CTGCGCCGAG
GCCAGCCTCT GGGCCGATCC GATCCGCGTC GCGGTCAACC TCTCGCCGGT GCAGTTTCGC
GATCCCGGGC TCGTGGCGAC GGTGCGCGAA GCGCTCGCCC TCTCGGGGCT GGCGCCGCAG
CGGCTCGAAC TGGAGGTCAC GGAATCGGTG CTGCTGGCCG CGAGCGAGGC CAATGTGGCG
ACGCTCCACG CCCTGCGTCA ACTCGGCGTG CGGATCGCGA TGGACGATTT CGGCACCGGC
TACTGCTCGC TGAGCTACCT GCAGCGGTTC CCCTTCGACA CGATCAAGAT CGACCGTTCC
TTCGTGAACC GGCTCGGCGA CGATCCGCAC TCAACGGCGA TCGTGCGGGC GGTGATCGGC
CTCGGCGCGA GCCTCGGCAT CGTCACCGTG GCCGAAGGCG TCGAGACCGA GGCCCAGTTC
GCGCAACTGC GGGCCGAGGG CTGCGGGGAG GTTCAGGGCT ACCTGTTCGG CCGCCCGGCC
CCCGCCGCGG AGGCCCGCCG GCTGATCCGG AGGGAGCCGG ACCTCGCGGC GTGA
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| Protein sequence | MPGYSDVVLG RLGRLADRCA LVTTRDGRAE RILWGGPGFR DWFEDEVHDR PLAGLPEEIR
RPVEEIAVRA LRSGEPASAR CDRITDGIVT TWGLVGVPLA DGGGTPLLLI HVDSDAVRTE
LMQAMFGATG QGLMAVGAIR DGEGAVVDFK IVAANQGAAE IFGRAIATLQ WQRLGALVPA
RLGVTGLLAG ILGRSDRAVF ELASPRSDGT VLHLKVEARA IGDLIAVAMT DIGDIKAREA
SFRFLFENNP LPMWLVDGET ARFVAVNEAA ITHYGFDREA FLARRLPDLS EAGAPSLSRD
GGLHRHLRAD GSVIEVTLFE RSLAFEGRPA VLGAAIDVTE QRRAEARITH MAHHDALTGL
PNRALFAVRL AEAIAEHART GVAAALLCLD LDKFKFVNDT LGHPAGDALL RQVAERITAC
LRREDLVARL GGDEFAVLLR NPDAATVDTI AGRIIEALSR PIRLGDRECQ IGVSVGFARL
PEHGTESDIL LRNADLALYR AKAEGGSVAH GFEAAMDSWA RSRRRRETDL HEAFARGELA
LAYQPVLGVR SRAILGFEAL LRWQHSVEGA IPPSDFVPLA EETGLIVPIG AWVLRQACAE
ASLWADPIRV AVNLSPVQFR DPGLVATVRE ALALSGLAPQ RLELEVTESV LLAASEANVA
TLHALRQLGV RIAMDDFGTG YCSLSYLQRF PFDTIKIDRS FVNRLGDDPH STAIVRAVIG
LGASLGIVTV AEGVETEAQF AQLRAEGCGE VQGYLFGRPA PAAEARRLIR REPDLAA
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