| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2124 |
|---|
| Symbol | rplD |
|---|
| ID | 6313514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2284445 |
|---|
| End bp | 2285065 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642650848 |
|---|
| Product | 50S ribosomal protein L4 |
|---|
| Protein accession | YP_001924821 |
|---|
| Protein GI | 188581376 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.478639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG ATATCACCAC GCTCGACGGC GGCTCCGCCG GCTCGCTCGA GCTCAACGAG
GCGATCTTCG GCCTTGAGCC GCGCGCCGAC ATCCTGCAGC GCATGGTGCG CTACCAGCTC
GCCAAGCGGC GCGCCGGCAC TCACGCGGTC AAGAACCGCT CGGATGTCGA TCGCACCACG
AAGAAGCTGT ACAAGCAGAA GGGCACCGGC AACGCCCGTC ACGGCGCCGC CTCCGCCCCG
CAGTTCCGCG GCGGCGGCCG GGCCTTCGGT CCGGTGGTGC GTGACCACAG CCACGACCTG
CCCAAGAAGG TCCGTGCGCT GGCCCTCAAG CACGCCCTGT CGTCGAAGGC CAAGACCTCG
ACCCTGATCG TCGTGGACGA CATCAAGGTC GACAGCCACA AGACCAAGGC GATGATCGAG
CGCTTCGAGA AGCTCGGCCT GTCGAGCGCG CTGATCATCG GCGGCTCGGA GGTCGACGAG
AACTTCGGCC GCGCCGCCCG CGCCATTCCG AAGATTGACG TGCTGCCCGT GCAGGGCATC
AACGTCTACG ACATCCTGCG TCGCGACACG CTCGTGCTGA CGCGCGCCGC CGTCGATGCG
CTGGAGGAGC GTTTCAAATG A
|
|---|
| Protein sequence | MKLDITTLDG GSAGSLELNE AIFGLEPRAD ILQRMVRYQL AKRRAGTHAV KNRSDVDRTT
KKLYKQKGTG NARHGAASAP QFRGGGRAFG PVVRDHSHDL PKKVRALALK HALSSKAKTS
TLIVVDDIKV DSHKTKAMIE RFEKLGLSSA LIIGGSEVDE NFGRAARAIP KIDVLPVQGI
NVYDILRRDT LVLTRAAVDA LEERFK
|
|---|
| |