Gene Mpop_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2118 
SymbolrpsL 
ID6313508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2278898 
End bp2279269 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content67% 
IMG OID642650842 
Product30S ribosomal protein S12 
Protein accessionYP_001924815 
Protein GI188581370 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.508108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA TCAACCAGCT GATCGCCCAG CCGCGCAAGG CGCAGAAGGC GCGCAACAAG 
GTGCCGGCGC TCAACGCCTG CCCGCAGAAG CGCGGCGTCT GCACGCGCGT CTACACCACG
ACCCCGAAGA AGCCGAACTC GGCGCTTCGT AAGGTCGCCA AGGTGCGCCT GACCAACGGC
TTCGAGGTGA TCGGCTACAT CCCCGGTGAG GGCCACAACC TTCAGGAGCA CTCCGTGGTC
ATGATCCGCG GCGGCCGCGT GAAGGACCTT CCGGGCGTGC GCTACCACAT CCTGCGCGGC
GTGCTCGACA CGCAGGGCGT CAAGAACCGC AAGCAGCGCC GCTCGAAGTA CGGCGCCAAG
CGTCCGAAGT AA
 
Protein sequence
MPTINQLIAQ PRKAQKARNK VPALNACPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNG 
FEVIGYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHILRG VLDTQGVKNR KQRRSKYGAK
RPK