Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2117 |
Symbol | |
ID | 6313507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2275029 |
End bp | 2278508 |
Gene Length | 3480 bp |
Protein Length | 1159 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642650841 |
Product | conserved hypothetical proteinn |
Protein accession | YP_001924814 |
Protein GI | 188581369 |
COG category | [S] Function unknown |
COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTATCGCC TCACCGACAT CGCGATCTCG AATTGGTACC TCATCCGGCG CGAGCAGATC CGGATTCGGG GCGCGGCGGC GCTCGTCGGT CCCACGGGGG CGGGCAAGTC CACGATCTTC GACGCGGTCG GCACCGTGCT CGCCGGCAAC AACGCGAGTC GGCTGGCGCT CAACGCCTCC GCCTCCGGCC GCAGCGCCCG CACCGTGCGC GACTATTGCC TCGGCTGGAT CAGCGACCCG GCCGAGGGTG GGCGCCCGAC GCGGGAGGCC TGCGAGACCC TCATCGCCCT CGTCTTCGAA AACCCGCAGA GCGGGCGCGT CGTCACGGTC GGGTTGGCGC TCGCCGCCCG CTCCGAGGAG CCGAAGGAGG AGACGCTCTC GCGCTTCGTC GCCATCGGCC ACCGCTTCGA GATCGCCGAT TACGTGCGCG AGACGGCGGA GGGCAGCTTC GTCGCCCCCT GGGCCGAGGT CGCCGCGGAT CTGCGCCGCC GGGCCGACAG CTTCGAAGAG TTCCGCACCT CCGGCGAGCG CTTCACCGCC GCCGTGCTGG CCACCCTGCG CGAGGGCGCG GCGGTGCCCG ATCCGCGCCA GTTCCTGCGC ACCTTTTCCA ACGCGGTGGC GTTCAAGCCG ATCTTCGACA CCAGCGCCTT CGTGCGCAGC TTCGTGCTGG AAGCCGAGCC GCTCGACGTT GCCCGCATCC GCCAGTCGAT CGAAACTTGG CGGCGGCTCC TCGAGACCAT CGAGGAACTG GAGAAGCGCC TCGCCCACCT CTCGCGCATC TGCGAGCGCT ATGAATCCTG GGCGCGGGCC AGCCTCACCG CCGCGCTCGA CGAGATGCGC GCCGGCAGCG CCGATCTGCG CCGCCGCATC CTCGACCACG CCGAGGCCCG CCGCCTGCTC GCCGACACGT CGGAGCGCCT GCGTATCGCC CGCGAGAGCG TGGCGACGAG CCAGGGCTTC GTGCGCGAGA TCGACACCGA GATCGCCGCC CGTAAGGCGC TGATCGTCGG CAGCGCGGCG GAGGCGCGGC TCGCCGCATC GCATGCCGGT CTTGCCATGG TCGCCCGCGA CCGGCGCGAC CTGACGAACC GCCTCGCCGC CCTCGTCGGC CTCGTGCAGG ATGCCGGCCG GCTCAGCGCG ATCAGCGGTC CCTTGCGCCG GATCGATCTT CAGGCGGCGC GCCTCGTCGA GGCCTGTGCC CGCTCGGGCC TCCGCCGCGA GGCGCCCCCG GAGGACATTT TGCGCGGCGA CGGTCCGCTG AAGGGCTTGC TCGACGGGCT GGCGCAGATG CCGGACGTGT CCGGCGCCCT GGAAGAGGAA GCGGAAGACC TCGCTCTCAA GGCCCGCGAG CGCGAGAACG AGGTCCGCGG CCTCGACGCG CAGGTCAATG CCGGCCGCTC CTCGGCGGCG CGCCTGTCCT CGGACACCGA GGCGTTCCGC GAGGAGCTGG GCCGGCTCGG GATCGAGGCG GCGCCGATCT GCGAGCTCGC CGAGATCGTC GATCCGAAAT GGGGTCCGGC GCTGGAAGGT CTTCTCGGCC GCGCCCGCGA GGCGCTGGTG GTCGAGCCCG ACCGTCTCGA TCGCGCCTTC GCCCTCCTCG AATCGCGAAA GAACCAGTTC TTCCGCTGCC TGCTGGTGAA GACCACCGAC ACCGCCCGCC GTTCGGCGCG CCGCTTCGAC GACGGGCCGA TGGGCCTGAT CGAGACCGAC AGCGACCACG CGGAAGCCTT CCTGGCCGCC CGGCTCGGCG GCTACGATCT CGCCCCCGAC GACGCGGCGC TCCGCACCAT GAGCCGCGCC GTGGCGCCGA GCGGGCGCTC GACCTCGGGC ATGGCCTATT CGGTGGTGCG GCCCGTGCCG CTGATGATGA CCCGCGGCCA GCGCGGGCCC ACCGCCGAGA CCCGCCGCCA CCTCGACGAG GCGCGCGAGG AGGCGCGGGT TCTGCGCGCG GAGGCGACCG TGATGCGCGA GGCCGCCCGC ATCGCGAGCC TGCTGCGCAG CCGCCTCGCC GAGGCGCCGG TCGATCTCGA TGCGCTCCGC GCCGAGGCCG ACGCCATCGA GGGCCGCCGC CGCAGCCTCG CCACCGAGCA GGAGACGGTC GCCCGCGCCG ATGCCGGCGT GATCGAGGCG GAACTGAAGG AGCTTCAGAA GGAGCGCTCC GCCTATCTCA CCGAACTGGT GCAGGTGCTG GAGCCCAAGC GCGACGCCCT GCTCGCCGAA GAGGCGGGGC TGAAGGCGCG GGTCGCGCAA GGGAAGGAGG CGGCGCGCGC CGCGTTCGTC GCCTACCGCA CGGCGCTCCG GCGCTGGACC ACGGGCGACA CGGTGCGCAT CCGTCTCACC GGCACCGTCC CCGCCGACAT GCCGGGCACG ATCGCGGGAA TCGCCGGGGC ACGGGCCGAC CGGGCCGCGC TCGACACCAA GGCGCTGGCG TCTATGGCCT CGCAGGCCCG CGCCTCCGCC CGCGAAGCGG CCGACAGCGT GCGCAACCAG GGCCGCGCCG CCGAGCGCGA CCTCGCCGAG TACTGCGCCG CGTGGCGGGT CGAGAACCCG CTGGGCTCGG GCGAGCAGCC GGCCTCCTTC GGCTATGCCT GGGCCGTGCG CGAGCGCGAC GAGGTGGCCG GGCACGAACT GCGCCGCTAC CGCGACCAGT CGCTTCGGGC GGAGGCCGAG ATGCGCCGCC TGATGACCGA GGATCTGCTG ACCCGGCTCG CCGACAAGTT CGAGCGGATG CGGGCGCGGC TCGACGCGCT CAACGAGCGC CTCGCCTCGC AGACCTTCAC CGGCCAGACC TACGCCTTCG AGGCCGAGGT GGACCGGCGC TACGCCGCCG TCCACGCGCT GGCCACCGAG GTCGCCCGCT CGCCCGACGC GGCGCAGGCG GTCCTGCCAA GTCTCGACCA TTCGCCTGAG GAGGGGGCGG ACAAGAGCCC GCTCGCGGCG GCGCTGGCCG AGATCACGGC GCTGATCGAG GGCGAGGAGA GCGCGGCGCG GCTGGCCGAT TACCGCAACT ACTTCGTCTA CGAGATCGGC ATGCGCGACC GGGCGGGCAA CCGCACCACC CTGTCGAGCC GGGCGTTGCG CGGGTCCGGC GGCGAGGCGC AGGCGCCGTT CTACGTGGCG ATCGCCGCCT CCATGGCCTC CGCCTACTAT CCCGGCGACC GCCCCGGCGA CGAGACGCCG GGCCTCGGCC TCTGCCTCCT CGACGAGGCC TTCTCGAAGC TCGACGTGCG CAACAGCCAG TCGCTGGTCG ACCTCTTCCG CGCCTGGGGG CTCCAACTCC TGATCGCCGC GCCCGAGGAC AAGCGCACGA CGCTGACAGA GGTGATGGAC ACCGTCGTCA CCGTCTACAA GAGCCCGGAT CTGGGCTCCG TCCGAATCGA GGCGGAGCAT CCCCTGGAGA CGGCCAAGCG GGCGCTGGCC GAAATCAACC CGGAGCGGCG CGGAATCGAG GCGTTTCGCC TCTCGGATGC GGCCGAATAG
|
Protein sequence | MYRLTDIAIS NWYLIRREQI RIRGAAALVG PTGAGKSTIF DAVGTVLAGN NASRLALNAS ASGRSARTVR DYCLGWISDP AEGGRPTREA CETLIALVFE NPQSGRVVTV GLALAARSEE PKEETLSRFV AIGHRFEIAD YVRETAEGSF VAPWAEVAAD LRRRADSFEE FRTSGERFTA AVLATLREGA AVPDPRQFLR TFSNAVAFKP IFDTSAFVRS FVLEAEPLDV ARIRQSIETW RRLLETIEEL EKRLAHLSRI CERYESWARA SLTAALDEMR AGSADLRRRI LDHAEARRLL ADTSERLRIA RESVATSQGF VREIDTEIAA RKALIVGSAA EARLAASHAG LAMVARDRRD LTNRLAALVG LVQDAGRLSA ISGPLRRIDL QAARLVEACA RSGLRREAPP EDILRGDGPL KGLLDGLAQM PDVSGALEEE AEDLALKARE RENEVRGLDA QVNAGRSSAA RLSSDTEAFR EELGRLGIEA APICELAEIV DPKWGPALEG LLGRAREALV VEPDRLDRAF ALLESRKNQF FRCLLVKTTD TARRSARRFD DGPMGLIETD SDHAEAFLAA RLGGYDLAPD DAALRTMSRA VAPSGRSTSG MAYSVVRPVP LMMTRGQRGP TAETRRHLDE AREEARVLRA EATVMREAAR IASLLRSRLA EAPVDLDALR AEADAIEGRR RSLATEQETV ARADAGVIEA ELKELQKERS AYLTELVQVL EPKRDALLAE EAGLKARVAQ GKEAARAAFV AYRTALRRWT TGDTVRIRLT GTVPADMPGT IAGIAGARAD RAALDTKALA SMASQARASA REAADSVRNQ GRAAERDLAE YCAAWRVENP LGSGEQPASF GYAWAVRERD EVAGHELRRY RDQSLRAEAE MRRLMTEDLL TRLADKFERM RARLDALNER LASQTFTGQT YAFEAEVDRR YAAVHALATE VARSPDAAQA VLPSLDHSPE EGADKSPLAA ALAEITALIE GEESAARLAD YRNYFVYEIG MRDRAGNRTT LSSRALRGSG GEAQAPFYVA IAASMASAYY PGDRPGDETP GLGLCLLDEA FSKLDVRNSQ SLVDLFRAWG LQLLIAAPED KRTTLTEVMD TVVTVYKSPD LGSVRIEAEH PLETAKRALA EINPERRGIE AFRLSDAAE
|
| |