Gene Mpop_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2023 
Symbol 
ID6309775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2167841 
End bp2168500 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID642650747 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001924721 
Protein GI188581276 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAA AGGTCGAGAA AAAACGCGTC GCGATCCTGA TTTCGGGCCG CGGCTCGAAC 
ATGGTCTCGC TGATCGAGGC GGCGCGCGCG CCCGATTACC CGGCCGAGAT CGTACTCGTG
CTCTCGAACC GCCCCGACGC CGCCGGCCTC GACCGCGCGC GGGCGGCGGG CATCCCGGCG
CGCGCCATCG ACCACAAGGC GTTCCCCGAC CGCGCCGGCT TCGACGCCGC GCTCCAGGCG
GAACTGGAGG GGGCTGGGAT CGAGCTGATC GTGCTCGCCG GCTTCATGCG CATCCTCACC
GACGCCTTCG TCGAGGCTTG GGCCGGGCGG ATGATCAACA TCCATCCCTC GCTGCTGCCG
CTGTTCAAGG GGACGCACAC CCATGAGCGC GCCCTGGAGG CCGGGGTGCG GCTGCACGGC
TGCACCGTGC ATTACGTCGT GCCGGAACTC GATGCCGGGC CGATCGTGGC GCAGGCCGCG
GTGCCCGTCC TGCCGGGCGA CGACGCCGAC ACGCTGAGCG CCCGGGTCAT CGTGCAGGAG
CACCGGCTCT ACCCGGCCGC GCTCGCCCTG ATCGCGGGCG GCGGCGCCGT GCTGGAAGGG
GGCCGCGTGC GCTTCACCGC GCAGGCGCGC GACGCCGGGG CCGCGATCCT CTCGCTGTAA
 
Protein sequence
MSAKVEKKRV AILISGRGSN MVSLIEAARA PDYPAEIVLV LSNRPDAAGL DRARAAGIPA 
RAIDHKAFPD RAGFDAALQA ELEGAGIELI VLAGFMRILT DAFVEAWAGR MINIHPSLLP
LFKGTHTHER ALEAGVRLHG CTVHYVVPEL DAGPIVAQAA VPVLPGDDAD TLSARVIVQE
HRLYPAALAL IAGGGAVLEG GRVRFTAQAR DAGAAILSL