Gene Mpop_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2016 
Symbol 
ID6310024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2160466 
End bp2160792 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content66% 
IMG OID642650740 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001924714 
Protein GI188581269 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA AGACGGTCAC ACGCGCCGAT TTGAGCGAGG CCGTTTACCA GCAGGTCGGC 
CTGTCGCGGG CCGAATCGGC CGCCCTGGTC GAGACGGTGC TCGGCGAGAT CTGCAACTGC
CTGTCCTCGG GCGAGACGGT GAAGCTGTCC TCGTTCGGCT CCTTCGTGGT GCGCTCCAAG
GGCAAGCGCA TCGGCCGCAA TCCGAAGACC GGCGTCGAGG TCGAGATCGA GCCGCGGCAG
GTCATGGTGT TCAAGCCCTC GAACGTGCTC AAGGCCCGCA TCAACGGCGG CCACGTCAAC
GGGCTCGACG CGGACGAGGA CGAGTGA
 
Protein sequence
MAGKTVTRAD LSEAVYQQVG LSRAESAALV ETVLGEICNC LSSGETVKLS SFGSFVVRSK 
GKRIGRNPKT GVEVEIEPRQ VMVFKPSNVL KARINGGHVN GLDADEDE