Gene Mpop_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2006 
Symbol 
ID6308836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2150116 
End bp2151282 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID642650730 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001924704 
Protein GI188581259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.447532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC GCATCCGCGA TTACCTGCGC GCGCGCCGTG ACCTCGGCCG GGACGAAGGT 
CCGGTGATGG TGCTCGACCT CGATGTCGTG CGCGACAACT ACACGGCGTT CGCCCGTGCG
CTCCCCGACA CCCGCGTGTT CTACGCCGTG AAGGCGAACC CGGCGCCGGA GGTGCTGCGC
CTGCTCGCCG AGATGGGCTC CTGCTTCGAC ACCGCCTCGG TCGCCGAGAT CGAGATGGCG
CTCGCCGCCG GCGCCACGGC GGAGCGCGTC TCCTTCGGCA ACACCATCAA GAAGGAGCGC
GACATCGTCC GCGCGCTCAA GCTCGGCATC CGCCTCTTCG CCGTCGATTG CCAGGCCGAG
GTCGAGAAGA TTCTTTCCGC GACGACGCAG GCCGGCGTGG CGGCGGCCGA TGTGCAGGTC
TTCTGCCGCA TCCTCTGCGA CGGCGCCGGG GCCGACTGGC CGCTCTCGCG TAAGTTCGGT
TGCGAGCCGG AGATGGCGGT GAACGTGCTG GAGCACGCCC ACCGGCACGG CCTCAACGCC
TACGGCGTGT CCTTCCATGT CGGCTCGCAG CAGGCCAACA CCGAAGCCTG GGACGGGGCG
CTCGCCTCCG CATCCCAGAT CTTCCGGGAA TGCGCGCTTC GCGGCATCGG CCTGTCGATG
GTCAATCTCG GCGGCGGCTT CCCGACCAAG TACCTCAAGC AGGTGCCGGG CGTGGAGAGC
TACGGCGATG CGATCTTCCG CGCGCTCACC AAGCACTTCG GCAACCGCAT CCCGGAGACG
ATCATCGAGC CGGGCCGCGG CATGGTCGGT AATGCCGGCA TGATCGAGGC CGAGGTCGTG
CTCGTCTCCA AGAAGTCGGA GGCCGAGGAC GAGGTGCGCT GGGTCTATCT CGACATCGGC
AAGTTCGGCG GCCTTGCCGA GACCATGGAC GAGTCGATCC GCTACGCGAT CAAGACCGAC
CACGACGAGG ACCGCATGAG CCCCTGCGTC GTCGCCGGCC CGACCTGCGA CTCGGTCGAC
GTGCTCTACG AGAAGAACCA CTACCCGCTG CCGGTCTCCC TCTCGATCGG CGACAAGGTG
TGGATCGAGG GCGCGGGCGC CTACACCACG ACCTACGCGG CGGTGGCCTT CAACGGCTTC
CCGCCCCTCG AGCAGATCGT GATCTGA
 
Protein sequence
MTDRIRDYLR ARRDLGRDEG PVMVLDLDVV RDNYTAFARA LPDTRVFYAV KANPAPEVLR 
LLAEMGSCFD TASVAEIEMA LAAGATAERV SFGNTIKKER DIVRALKLGI RLFAVDCQAE
VEKILSATTQ AGVAAADVQV FCRILCDGAG ADWPLSRKFG CEPEMAVNVL EHAHRHGLNA
YGVSFHVGSQ QANTEAWDGA LASASQIFRE CALRGIGLSM VNLGGGFPTK YLKQVPGVES
YGDAIFRALT KHFGNRIPET IIEPGRGMVG NAGMIEAEVV LVSKKSEAED EVRWVYLDIG
KFGGLAETMD ESIRYAIKTD HDEDRMSPCV VAGPTCDSVD VLYEKNHYPL PVSLSIGDKV
WIEGAGAYTT TYAAVAFNGF PPLEQIVI