Gene Mpop_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1986 
Symbol 
ID6309979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2127068 
End bp2127847 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID642650710 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001924684 
Protein GI188581239 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA CCGTCACGCT CCCGCGCAGC AATCCCCTCA TCCTCCGGCT CCGCTTCGGT 
GCGGATCTCG ATGCCGGGGA CAAGGCCCTG CTCGCCGATC TGTCCCGGTC CAGCCGCGGC
CTGGAGCCCC AGCAGGACAT CGTCCGGGCC GGCGACCGGG CCTCGGGCGT CCACCTCGTC
CTCGAAGGCT ACGCCTTCCG CTACAAGATC GTCGATGACG GGCAGCGCCA GATCCTCGGG
CTGCTCCTGC CGGGCGACTT CTGCGACCTG CAATCGATCG TGCTCGGCCC GTCCGACCAC
TACATCGCCG CCCTGACGGC CTGCACCATC GCCGACATCC CGCAGGATCG CGTGGATGCG
CTGGTCTTCC GCGATTCACG CCTCGCGCGG GCGCTGTGGT GGGCCACCCT CGTCGATGAG
AGCATCCTGC GGGAATGGCT CGCCAGCATG GGCCAGCGCG CCGCCGACAA GCGCATCGCC
CACCTGTTCT GCGAATTGCT GCTGCGCCAG CAGCTCGTCG GCGCCGCCGG GGCGTGCGAC
TGCCCGCTGC CCCTGACGCA GCCGATGCTC GCCGACATCC TCGGCATCAC CACGATCCAT
GTCAGCCGCA TCCTGCGCGA CCTCCGCACG TCCGGGCTGA TCCGGCTGAA GGATCGCCGG
CTGCACGTCC CGGACGTCGC ACGCCTGCAG GCGTTCTGCG ACTTCGATCC CACCTACCTG
CACCTCGTCA GACAGCCCGA TCGCGCTCCT GCCAGGGACG CGGCGCAGGC CGGGCCCTGA
 
Protein sequence
MDATVTLPRS NPLILRLRFG ADLDAGDKAL LADLSRSSRG LEPQQDIVRA GDRASGVHLV 
LEGYAFRYKI VDDGQRQILG LLLPGDFCDL QSIVLGPSDH YIAALTACTI ADIPQDRVDA
LVFRDSRLAR ALWWATLVDE SILREWLASM GQRAADKRIA HLFCELLLRQ QLVGAAGACD
CPLPLTQPML ADILGITTIH VSRILRDLRT SGLIRLKDRR LHVPDVARLQ AFCDFDPTYL
HLVRQPDRAP ARDAAQAGP