| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1972 |
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| Symbol | |
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| ID | 6312731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 2110882 |
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| End bp | 2112993 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642650696 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001924670 |
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| Protein GI | 188581225 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0983998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGAGG CGCGGAAGCG GGCGATCGGG GAACGGCGAG CGGTCTCGGT GGGACTTGCC
GCGCTCCTCG GCTTTCATGC CGGCGCCGCA GCCGCCACCG ATCTCGCCGA GCGCGCCCGG
CCCCGCTTCC TCGACTGGTC CGGCCTCTAT GCCGGCGTGC AGGGCAGCGC GGGCGCCTCG
TTCGGCAATT ACGACATCGG ACCGACCACG ATCGGAACGC GGCGCGTCCG GACGATCTCG
ACGGGAGACG CCACCGGCAG CCGCGACCTC GGCGGCGACG CCACCACGGT CGCGGCCGGC
GCCTTCGCCG GCTGGAACTG GCAGGACGGC GCCATCGTCT ACGGCCTTGA GGCCGACCTC
GCCGGCACCA ACCTCAAGCG CGGCGCACGC TCCGACGCGC CGGGCTTCGG CTACGAGGCG
GTCGATCCGC CCTTCGCCCT GGTTCGCGAG AAGACCGACC TGTTCGGAGC CGCCCGCGCA
CGGCTCGGCT ACGCCTTCGG CAACAACCTG ATCTACGCGA CCTTCGGGCT CACCGGCGCC
AACGGACGGG TGCTCGCGAC TTACCCGGAT CTGTCCGGCG GCCCGACCGC CACCGCTGCC
CGCAACGTCT CCTATCTCGG ATACACCCTC GGGGCGGGCG TGCAGTTCGC CGTCGATCCG
CACCTCTCAC TCGGGATCGA CTATCGCTAC AGCGATCTCG GCGAGAGCGC CCGCTTCGGT
CTCGGCACCC TGCCGGGGGC CGACGGCGGG CCGGTGACGA CCCGCACCGG CTTCGTGTCC
AACAAGATGA TGGCGCGGCT GATCTGGCAC CCTGAGGCGC TGGCCCTGGT GCCGGACGAG
GAGGACGAGC CCCCGAAGGA TGCCCGCTTC TCGCTGCACG GCCAGACCAC CTTCGTGAAC
CAGGGTGTGA CGGGCTTTCG CGCGCCGTAT CGCGGGCCGC AGAGCCTCGT GCCGGACCAG
GCGCAGGCGA CGACGACCGC GACGCTGTTC CTCGGCCTCA AGCTCTTCGA GGGCACCGAA
CTCTACTACA ACCCGGAATT CAGCCAGGGC TTCGGCCTGT CGCGGACGCT GGGCGTTGCG
GGCTTCGTCA ACGGTGAGGC GCAGAAGGCC GGCGCCCCGT TCCCGAAGCT GCGCTCGAAC
CGCTACTTCG TGCGCCAGAC CTTCGGCCTC GGCGGCGAGA CCGAAGCGGT GCCCGACGGG
CCGAACTCCA TCGCCGGCAC CCGCGATGTC GAGCGCATCA CCGTGATCGC CGGCAAGTTC
GCGCTCGGCG ACTTCTTCGA CGGCAACGCC TACGCCCACG ACCCGCGGGT CGATTTCATG
AACTGGGGCT TGTGGGCCTC CGCGGCCTGG GATTTCCCGG CCAACCTGCC CGGCTTCACC
CAGGGCGTTA TGGTCGAGTA CAACCGCGCG GACTTCGCGG TGCGCGCCGC CTACACGCAG
GTGCCGAAGG AGCCCTCCTC CGACGTGCTC GACCCGCGGG TGTTCGAGCG GGCCGGCGCC
GTCATCGAGT TCGAGGAACG CCACACCCTA CCGCTGCTCG ACCAGCCGGG GCGCCTACGT
CTCGGCCTGT TCTCGAATGT CGGCAACACC GCGAACTTCC GGCAGGTGGT GGCGCTGACG
CAATCCGGTG ACTTCGCCGA CATCAACACG GCAGCGGCAG CGACCCGCGA GCCCCGGCGC
AAGAGCGGCG CCTACCTCAA CCTCGAACAG GCGCTGACCG CCGATCTCGG CCTGTTCGCC
CGGGCGAGCG TCAATGACGG GCGCAACGAG AGCCTGTCCT TCACCGATAT CGACGGCTCG
GTCTCGGGCG GCCTGTCGCT CAAGGGCACG GCCTGGGGCC GGCCGCAGGA CACGATCGGC
TTCGGCGCCG CGGCCAACCG CGTCTCACCC TCGCACCGCG CCTACTTCGC CAACGGGGGC
CTCGGCCTTC TGATCGGCGA CGGGCGCCTC GACCGCTACG CCCCGGAGCG GGCGGTGGAG
GTCTACTACG CCCTGAACCT GACGAAGGCG GTGACGATGT CCTTCGACTA CCAGCATGTT
GAGAACCCGG CCTATAACCG CGACCGCGGC CCGGCCGACT TCATCGGCAC GCGGCTGCAC
ACGGATTTCT GA
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| Protein sequence | MFEARKRAIG ERRAVSVGLA ALLGFHAGAA AATDLAERAR PRFLDWSGLY AGVQGSAGAS
FGNYDIGPTT IGTRRVRTIS TGDATGSRDL GGDATTVAAG AFAGWNWQDG AIVYGLEADL
AGTNLKRGAR SDAPGFGYEA VDPPFALVRE KTDLFGAARA RLGYAFGNNL IYATFGLTGA
NGRVLATYPD LSGGPTATAA RNVSYLGYTL GAGVQFAVDP HLSLGIDYRY SDLGESARFG
LGTLPGADGG PVTTRTGFVS NKMMARLIWH PEALALVPDE EDEPPKDARF SLHGQTTFVN
QGVTGFRAPY RGPQSLVPDQ AQATTTATLF LGLKLFEGTE LYYNPEFSQG FGLSRTLGVA
GFVNGEAQKA GAPFPKLRSN RYFVRQTFGL GGETEAVPDG PNSIAGTRDV ERITVIAGKF
ALGDFFDGNA YAHDPRVDFM NWGLWASAAW DFPANLPGFT QGVMVEYNRA DFAVRAAYTQ
VPKEPSSDVL DPRVFERAGA VIEFEERHTL PLLDQPGRLR LGLFSNVGNT ANFRQVVALT
QSGDFADINT AAAATREPRR KSGAYLNLEQ ALTADLGLFA RASVNDGRNE SLSFTDIDGS
VSGGLSLKGT AWGRPQDTIG FGAAANRVSP SHRAYFANGG LGLLIGDGRL DRYAPERAVE
VYYALNLTKA VTMSFDYQHV ENPAYNRDRG PADFIGTRLH TDF
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