| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1743 |
|---|
| Symbol | |
|---|
| ID | 6314013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1875032 |
|---|
| End bp | 1876159 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650466 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_001924441 |
|---|
| Protein GI | 188580996 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.106017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.444535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGGG GATCGGGTGT GGGTGAGGAA CGAACGCCGC CTCGGGGCCG GATGGAGGGC
GCGCGGATCG CGCCCGAGGC GCGGCGCGGG CGCGGGGCGA CGGCCAATCC GGACGGGCGC
TTCGAGGCGA CCCGGCGCGA GGGGTTCGAC GACGGCTGGC CGGAGGAGGT GGCGGGCGCC
CGGCGCACCG ATGTGACGCC GGAGCGCGCC CGCCACATCA TCACGCGCAA CGCCTCGCCC
GACATCTCGT TCGACCGTTC GATCAACCCG TATCGCGGCT GCGAGCACGG CTGCATCTAC
TGCTTCGCCC GGCCGAACCA CGGCTATGTC GGCCTCTCGC CGGGGCTCGA TTTCGAGACG
CGGCTGTTCG CGAAGCCCGA CGCGGCGGCC CTTCTGGAGC GCGAATTGTC GGCTCCCGGC
TACCGGCCGC GGACCATCGC GCTCGGGACT GCGACCGACC CCTACCAGCC GATCGAGCGC
AGCCACGGCC TCACCCGTTC CGTGCTGGAG GTGCTGGCCC GCTTCCGCCA TCCGGTCGGC
ATCGTCACCA AGTCGAACCT GATCCTGCGC GACCGCGACC TCCTCGCGGC GATGGCGGCG
CAGGATCTCG TGAAGGTGGC GATCTCGGTC ACCACCCTCG ATCCGGATCT GGCCCGCCGC
ATGGAGCCCC GCGCGCCGCA TCCGCGCAAG CGCCTGGAGG CGATCCGCGC CCTGAGCGAA
GCGGGCGTGC CGGTGATGGT GCTGACCGCT CCCGTCATCC CCTCGCTCAA CGATCACGAG
ATCGAGGCGA TCCTGGAAGC GGCCCGCGCA GCGGGGGCGC GGGAGGCCGG CTACGTGCTG
CTGCGCCTGC CGCACGAACT CGACGACCTC GTCGGCGACT GGTTCACCGA GCATTATCCG
GGGCGGAAGG CGCATGTCTT CTCGCTCCTG AGCGGGGCCC GCGGCGGCAA GACCTACGAC
GCCGCCTTCG GCACCCGCAT GATCGGCCAG GGCCCCTACG CCGATCTGAT CCGAAGCCGG
TTCGCCCTGG CCAAGCGCCG CCTCGGCTAC TCCGACGAGC CGCTCCGCCA GACGACCGCG
CTGTTTCGCA GGCCGGAGGC GGCGGGGGAC CAACTCGCGC TGTTTTGA
|
|---|
| Protein sequence | MARGSGVGEE RTPPRGRMEG ARIAPEARRG RGATANPDGR FEATRREGFD DGWPEEVAGA
RRTDVTPERA RHIITRNASP DISFDRSINP YRGCEHGCIY CFARPNHGYV GLSPGLDFET
RLFAKPDAAA LLERELSAPG YRPRTIALGT ATDPYQPIER SHGLTRSVLE VLARFRHPVG
IVTKSNLILR DRDLLAAMAA QDLVKVAISV TTLDPDLARR MEPRAPHPRK RLEAIRALSE
AGVPVMVLTA PVIPSLNDHE IEAILEAARA AGAREAGYVL LRLPHELDDL VGDWFTEHYP
GRKAHVFSLL SGARGGKTYD AAFGTRMIGQ GPYADLIRSR FALAKRRLGY SDEPLRQTTA
LFRRPEAAGD QLALF
|
|---|
| |