| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1643 |
|---|
| Symbol | |
|---|
| ID | 6312559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1771106 |
|---|
| End bp | 1773118 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642650367 |
|---|
| Product | K potassium transporter |
|---|
| Protein accession | YP_001924342 |
|---|
| Protein GI | 188580897 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CTGCCAGCCC GAATTCGGCG AGCCCAGAGG CGGCCCGTCC GAGCCCGTCG
GCCGCCCCCG CCGCGGGCGG GCCGGCGCCC GGCGAGGGCG GCCCGGTCGC GGCGTCGGCG
GGCGCCGTCG ATGCGACGCC GGAGGAGGCG CACGGCCACG CCAAGACCGG CTTCTGGGCG
CTCACCATCG GCTCCGTCGG CGTCGTCTAC GGCGATATCG GCACGAGCCC GCTCTACGCC
TTCCGCGAGG CGCTCGCGCC CTCGCGCGCC GACGGCATCC TGCTGTCGGA GGAGGTGATC
GGCACCGCCT CGCTGATCAT CTGGGCGCTG CTCCTGATCG TGACGATCAA GTACGTCGCG
ATCCTTCTGC GCATGGACAA TAACGGCGAG GGCGGCATCC TCTCGCTGAT GGCCCAGGCC
CGCCATGCGC TCGGCGGTTC CAAGGTCGTG TTCATGCTGG GCCTGCTCGG CGCTTCGCTG
TTCTACGGCG ATTCCGTCAT CACGCCCGCG ATCTCCGTGC TCTCGGCGGT GGAGGGCCTG
AAGCTCGTCA CGCCGGCCTT CGACGACTAC GTGCTGCCGA TCACGGTGGC GATCATCCTC
GGCCTGTTCG CGGTCCAGAG CCATGGCACG GCCCGTGTCG CGACCTTCTT CGGCCCGGCC
ATGGTGGTGT GGTTCCTGGC GATGGCCGCC GCCGCCCTGC CCCACATCGC CGGCAATCCC
GGCGTGCTCG CTGCCTTCAA TCCCTGGTAC GCGGTGCATT ACCTGCTCGG TCACGGCACC
GGGGCGCTGG TGGCCCTCGG CGCGGTGTTC CTGGCGGTGA CGGGGGCGGA AGCCCTGTTC
GCCGATCTCG GCCATTTCGG GCGCCGCCCG ATCCAGGTGG CGTGGCTCGG CCTCGTCGCC
CCCTGCCTCG TCCTGAACTA TCTTGGCCAG ACCGCCCTGG TGCTGGCCAA GCCCGAGACC
ACGGACCCGT TCTACCAGCT CGTGCCGGAA TGGGGCCTGA TCCCCATGGT GCTGCTGGCG
ACGCTGGCCA CGGTCACCGC GAGCCAAGCG GTCATCACCG GTGCCTTCTC TCTGTCGCGG
CAGGCGATCC AGCTCGGCAT GCTGCCGCGC ATGGAGATTC GCCATACCTC GGAGGCGCAT
TCCGGCCAGA TCTACCTGCC GCAGATCAAC ACCCTGCTCG GACTCGGCGT GGTGATCCTG
GCGGTGACCT TCCGCTCCTC CTCGGCCCTG GCCTCGGCCT ACGGCATCGC GGTGACGGGC
ACGATGCTGC TCACCGCCTC CATGGCCTAC GTGGTGCTGT GGAAGGTGGT GCGGCTCTCG
CCGCTGGTCT CGGCGGCCAT CATCATGCCG TTCATCGTGC TGGAAACCCT GTTCCTGCTC
TCGAATCTGC TGAAGCTGCA CGAGGGCGGC TACGTGCCCC TGATCCTCGC CGGCGGCCTG
ATGCTGATGA TGTGGACCTG GGTGCGGGGC GTCACGATCC TGTTCAACAA GACCCGCAAG
ACCGACGTGC CGCTGATCGA ACTCGTCGGC ATGCTGGAGA AGAGCACCTC CTACCAGCGG
GTGAAGGGCA CCGCGGTGTT CCTCACCAGC GATCCCGAGA TCGCGCCGGC CGCGCTCCTG
CACAACATGA AGCACAACAA GGTGATCCAC GAGAAGAACG TGGTGCTCAC CGTCGAGACC
ATGGATCGGC CCCGGGCGAC GCAGGCGGAG CGGGTGCGTA TCGAGCCCGT GGGCTTCGGC
TTCTACCGGG TGGTGATGCG CTTCGGCTAC ATGGAGACGC CCAACATCCC CCGCACCCTG
GCCCTGCTCA AGCGCGAAGG CTTCAAGTTC GACATCATGT CGACCTCGTT CTTCCTGTCG
CGCCGCTCGA TCCGCCCGGC CGCCCATTCC GGCATGCCGC TGTGGCAGGA CCGGATCTTC
ATCACGCTCG CCAAGAACGC CAACGACGCC ACGGACTTCT TCCAGATCCC GACCGGCCGC
GTCGTCGAAG TCGGTACGCA GGTGACGGTG TAG
|
|---|
| Protein sequence | MTQPASPNSA SPEAARPSPS AAPAAGGPAP GEGGPVAASA GAVDATPEEA HGHAKTGFWA
LTIGSVGVVY GDIGTSPLYA FREALAPSRA DGILLSEEVI GTASLIIWAL LLIVTIKYVA
ILLRMDNNGE GGILSLMAQA RHALGGSKVV FMLGLLGASL FYGDSVITPA ISVLSAVEGL
KLVTPAFDDY VLPITVAIIL GLFAVQSHGT ARVATFFGPA MVVWFLAMAA AALPHIAGNP
GVLAAFNPWY AVHYLLGHGT GALVALGAVF LAVTGAEALF ADLGHFGRRP IQVAWLGLVA
PCLVLNYLGQ TALVLAKPET TDPFYQLVPE WGLIPMVLLA TLATVTASQA VITGAFSLSR
QAIQLGMLPR MEIRHTSEAH SGQIYLPQIN TLLGLGVVIL AVTFRSSSAL ASAYGIAVTG
TMLLTASMAY VVLWKVVRLS PLVSAAIIMP FIVLETLFLL SNLLKLHEGG YVPLILAGGL
MLMMWTWVRG VTILFNKTRK TDVPLIELVG MLEKSTSYQR VKGTAVFLTS DPEIAPAALL
HNMKHNKVIH EKNVVLTVET MDRPRATQAE RVRIEPVGFG FYRVVMRFGY METPNIPRTL
ALLKREGFKF DIMSTSFFLS RRSIRPAAHS GMPLWQDRIF ITLAKNANDA TDFFQIPTGR
VVEVGTQVTV
|
|---|
| |