| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1608 |
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| Symbol | rplT |
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| ID | 6312435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1736883 |
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| End bp | 1737248 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642650332 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001924307 |
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| Protein GI | 188580862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.248279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0149786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCG TCAAGCGCGG CGTGACCAGT CACGCGAAGC ACAAGAAGGT TCTGAAGGCC
GCCAAGGGCT ATTACGGCCG GCGCAAGAAT ACGATCCGCA TCGCCAAGCA GGCGGTGGAG
AAGGGTCTGC AATACGCCTA CCGCGACCGC AAGAACAAGA AGCGCACCTT CCGCGCCCTC
TGGATCCAGC GGCTCAACGC GGCGGTGCGC GAGCACGGCC TGACCTATTC CCGCTTCATC
AATGCCCTCG CCAAGTCGGG CATCGAGGTG GACCGCAAGG CCCTTTCCGA GCTCGCCATC
CACGAGCCGG CCGCCTTCGC GGCGGTGGTC GAGAAGGCGA AGTCGGCCCT GCCGAAGGCC
GCCTGA
|
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| Protein sequence | MARVKRGVTS HAKHKKVLKA AKGYYGRRKN TIRIAKQAVE KGLQYAYRDR KNKKRTFRAL
WIQRLNAAVR EHGLTYSRFI NALAKSGIEV DRKALSELAI HEPAAFAAVV EKAKSALPKA
A
|
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