| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1602 |
|---|
| Symbol | |
|---|
| ID | 6312476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1730649 |
|---|
| End bp | 1731482 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650326 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001924301 |
|---|
| Protein GI | 188580856 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0340127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA TGGCCCTCAC CTCCGAAGAG ATCGAACGCT ACGCCCGCCA CCTCGTCCTG
CGCGAGGTCG GCGGCCCGGG ACAGGCCCGG CTGAAGGCCG GGCGCGTGCT GGTGATCGGT
GCGGGCGGGC TCGGGGCACC GCTGATCCAG TATCTCGCCG CCGCCGGCAT CGGCACCATC
GGCATCGTCG ACGACGACAC CGTCTCGCTG TCGAACCTGC AGCGGCAGGT CATCCACGGC
ACGCCGGATG TCGGCCGCCC GAAGGTCGAG AGCGCGGCGG ACGCCGTCAG GCGGCTCAAC
CCGCATGTGC GGGTCGAGAC CCATGCCCTC CGGCTGAATC CGGAGAACGC GCCCGCCCTC
CTCGCGGGCT ACGATCTCGT CGCCGACGGA TCCGACAACT TTTCGACCCG CTACGCCGTC
TCGGACGCCT GCTTCCACGC GAAAAAGCCG CTGGTGACGG CGGCGCTCGG AGCCTTCGAC
GGCTCGCTCA CCACGATCCG CGCCCACGAG ACCGGTCCGA CGGGCGAGCC GAATCCGACC
TATCGCTGCC TGTTCCCGAG TCCGCCGCCG CCCGGCAGCG TCGCCCCCTG CGCCGAAGCC
GGGGTGCTCG GGGCCCTCGC GGGCGTCATG GGCTCGCTGA TGGCGATGGA GGTGATCCGG
GCCGTCGTCG GCTTCGGCGA GCCCCTGGTC GGGCGCCTGC TGATGGTCGA TGCCCGCTCG
ATGCGGTTCG AGACGCTGGC CTATGCCTGG GATCCGGAGA ACCCGCTGAA CGGGGCCGGG
GTCAGGACAG ACCCGGCAGC CGCGCCGGCG GCGCTCCCGC CTCGGCCGCG TTGA
|
|---|
| Protein sequence | MAGMALTSEE IERYARHLVL REVGGPGQAR LKAGRVLVIG AGGLGAPLIQ YLAAAGIGTI
GIVDDDTVSL SNLQRQVIHG TPDVGRPKVE SAADAVRRLN PHVRVETHAL RLNPENAPAL
LAGYDLVADG SDNFSTRYAV SDACFHAKKP LVTAALGAFD GSLTTIRAHE TGPTGEPNPT
YRCLFPSPPP PGSVAPCAEA GVLGALAGVM GSLMAMEVIR AVVGFGEPLV GRLLMVDARS
MRFETLAYAW DPENPLNGAG VRTDPAAAPA ALPPRPR
|
|---|
| |